Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq347 102 7e-17
seq475 91.5 1e-13
>seq347
Length=76637
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| |||| || || | ||||| | || |||||||||||
Sbjct 19764 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 19823
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||||||||| || || ||| || ||| ||||| || || ||||| || ||||
Sbjct 19824 GACACTATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACC 19881
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | || || |||||||| || | || |||| || || | || ||||
Sbjct 19882 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGACTACA 19941
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || || || || ||||| || || || || || || || | |||||
Sbjct 19942 ACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGG 19990
>seq475
Length=36479
Score = 91.5 bits (100), Expect = 1e-13
Identities = 130/181 (72%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||| ||||| || || ||||||| | || ||||||||||| |||||||||
Sbjct 18211 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACTATC 18270
Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125
|| || || ||| || ||| ||||| || || ||||| || ||||| || ||
Sbjct 18271 GA--CAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAACGCC 18328
Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185
| || ||||| ||||| || | || |||| |||||| | ||| ||||| || || |
Sbjct 18329 TGATCTTTGCTGGCAAGCAGCTTGAGGATGGACGCACTCTTTCCGACTACAACATCCAGA 18388
Query 25186 A 25186
|
Sbjct 18389 A 18389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433308538833275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |