Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq512 123 3e-23
>seq512
Length=30657
Score = 123 bits (136), Expect = 3e-23
Identities = 366/561 (65%), Gaps = 9/561 (2%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| || ||||| || || | ||| ||||| || || || | ||| || ||| || |
Sbjct 18005 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAG 17946
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| | | || || || ||||||||||| || || || || || || || || ||
Sbjct 17945 GCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAA 17886
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-C 93269
||||| || ||||| ||||| || || | ||| | |||||| | |||| || |
Sbjct 17885 GATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAA---GGTAGAATCCTTGTC 17829
Query 93270 T--GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
| |||||| | | |||||| || || || |||||||| ||||| | || ||||| ||
Sbjct 17828 TTGGATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGC 17769
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
|| || ||||| || | || || |||||||| ||||| | || || ||
Sbjct 17768 ATTGAAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTA 17709
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
| || | || | ||||| || |||||||| |||||||| || | || || |
Sbjct 17708 TGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGG 17649
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
||| || || || || | ||| | ||| || || ||||| || || || || ||
Sbjct 17648 GATTTGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGC 17589
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATC 93564
|| || ||||| | | || || || | |||||| || || | | || |
Sbjct 17588 GGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTT 17529
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||| ||| || || || || ||||| | || || | ||||| || ||||| || ||
Sbjct 17528 CCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGC 17469
Query 93625 TTTTTTGTACATATCCCATAT 93645
|| |||||||| | ||| ||
Sbjct 17468 CTTCTTGTACATCTGCCAGAT 17448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556835149599400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |