Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 123 2e-23
seq347 114 1e-20
seq475 98.7 8e-16
>seq1689
Length=16827
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||| | || || || ||| | || ||||| ||||| | |
Sbjct 15258 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACGATTACGCTTGAGGTGGAGTCGTCG 15317
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || ||||||||||||||||| ||||| || || ||
Sbjct 15318 GATACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGCATTCCTCCGGACCAG 15377
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || || || ||| | |||||| ||||||| | || || ||||||
Sbjct 15378 CAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAAC 15437
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || | ||||| ||| | || | || || |||
Sbjct 15438 ATTCAGAAGGAGTCGACTCTGCATTTGGTTCTCCGTCTTCGTGGTGGT 15485
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| || | || || || || ||||||| || || || | ||
Sbjct 15030 ATGCAAATCTTCGTTAAGACCCTTACTGGCAAGACCATCACTCTCGAGGTTGAGTCGTCC 15089
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || || || || ||||||||||| || || || || ||
Sbjct 15090 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 15149
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || ||||| ||||| ||| | |||||| ||||| ||||||| ||||||
Sbjct 15150 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 15209
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || ||||| | || || || | || | ||||| |||
Sbjct 15210 ATTCAGAAGGAGTCCACTCTTCACTTGGTCCTTCGTCTTCGCGGTGGT 15257
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| || || || || || |||||||| | ||| | | ||
Sbjct 14826 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACCATCGACAACGTTAAGAGC 14885
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || |||||||||||||| ||||| || || || |||||||| || || ||||| ||
Sbjct 14886 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAAG 14945
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
|| | ||||| ||||||| ||||||| |||||||| || || || || ||| | ||
Sbjct 14946 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 15005
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
|| || | || |||| || |||
Sbjct 15006 TTGGTCCTCCGTCTGCGTGGTGGT 15029
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | ||||| || || | || || ||||| || | |
Sbjct 15486 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 15545
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | |||| || || ||||| |||||||| ||||| || || ||
Sbjct 15546 GATACCATCGATAACGTCAAGTCGAAGATCCAAGATAAGGAGGGCATTCCCCCGGACCAG 15605
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || ||||| ||| | ||||| |||||| | || |||||||||
Sbjct 15606 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCTGATTACAAC 15665
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || ||||| | ||| | || | || || |||
Sbjct 15666 ATCCAGAAGGAGTCTACGCTACATCTTGTTCTCCGCCTCCGTGGTGGT 15713
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || || || || || || ||||||| || || || | |
Sbjct 15714 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCTTCG 15773
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || ||||| || ||||||||||| ||||| || ||
Sbjct 15774 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 15833
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || ||||| || || ||| | |||||| | | || | ||| ||||||
Sbjct 15834 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCAGGACGCTGAGCGACTACAAC 15893
Query 22399 ATTCAAAAAGA 22409
|| || || ||
Sbjct 15894 ATCCAGAAGGA 15904
>seq347
Length=76637
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | || || || || |||| ||||| ||||| | ||
Sbjct 19764 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 19823
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || || || ||||||||||| ||||| || || ||
Sbjct 19824 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 19883
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || |||||||| ||| | |||||| ||| ||| | || || ||||||
Sbjct 19884 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGACTACAAC 19943
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || ||||| | || || || || || | || ||||||
Sbjct 19944 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGGT 19991
>seq475
Length=36479
Score = 98.7 bits (108), Expect = 8e-16
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287
|| || || || || || || || || |||| ||||| ||||| | |||| || |
Sbjct 18211 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACTATC 18270
Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347
||| || |||| || || || ||||||||||| ||||| || || || ||||| ||
Sbjct 18271 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAACGCCTG 18330
Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| ||||| ||| | |||||| ||||| | ||||| |||||||| || ||
Sbjct 18331 ATCTTTGCTGGCAAGCAGCTTGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAA 18389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419709149622025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |