Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2427 96.9 7e-15
seq514 96.9 7e-15
>seq2427
Length=24716
Score = 96.9 bits (106), Expect = 7e-15
Identities = 123/167 (74%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||| || ||||| || ||||||| ||||| | ||||| || || |
Sbjct 18495 CCAACTTCGGTCTCGATGCCGAGCTTGTCTCTCACTCCCGCATGCTGGGTCTCTCCGGTG 18436
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
||||| ||||| | ||| ||| || |||| |||||| | ||||| |||||||
Sbjct 18435 GCCAGCGTGTCAAGGTCGTCCTCGCCGCCTGCTC-GTGGCAGCGTCCTCATTTGATCGTC 18377
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837
||||| |||||||||||||| |||||||| || ||| || |||||
Sbjct 18376 CTCGATGAGCCTACCAACTACCTGGACCGTGACTCCCTTGGTGCTCT 18330
>seq514
Length=32850
Score = 96.9 bits (106), Expect = 7e-15
Identities = 138/189 (73%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| ||| ||||| || ||||| || || ||||| |||| |||||||||| ||
Sbjct 17764 TCATTGGTGGCAACGGTGCCGGAAAGTCCACTCTCATCAAGCTCCTTACTGGCGAGA-CC 17822
Query 280234 AGGCCACTGAGGGGTCCGT-TTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCA 280291
| ||| | || |||| ||| |||||| |||||| |||| || | |||| | ||
Sbjct 17823 ATCCCAACCACTGG-CCGTGTTGAGAAGCACCCCAACTTGCGTATTGGTTACATTAAGCA 17881
Query 280292 GCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTG 280351
||||||| | | ||| | |||| || || || | |||||| ||||| ||| | |||||
Sbjct 17882 GCACGCTCTTGAGCACGTTGAGATGCATCTCGAGAAGACTCCCAACCAGTACCTCCAGTG 17941
Query 280352 GCGCTATGC 280360
||| || ||
Sbjct 17942 GCGTTACGC 17950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027788271649085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |