Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 158 2e-33
seq475 125 1e-23
seq1428 105 1e-17
seq514 91.5 3e-13
>seq1689
Length=16827
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | |||||||| ||||| || |||||||| ||||| ||
Sbjct 15712 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGAC 15653
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || || | || ||||| || |||
Sbjct 15652 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 15593
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| ||||| ||||| | ||||||| |||||||| || | || || |||
Sbjct 15592 ATGCCCTCCTTATCTTGGATCTTCGACTTGACGTTATCGATGGTATCCGACGACTCGACT 15533
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || || ||||| ||||| ||||||||||| || |||||
Sbjct 15532 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15486
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||||||| || ||| ||| || |||||||| || |||
Sbjct 15940 CCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 15881
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| ||||| ||||| || | |||||| || || || || || | || ||||| |||||
Sbjct 15880 AGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGG 15821
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || |||||||| | ||||||| ||||||||||| | || || ||
Sbjct 15820 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACC 15761
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| ||||| || | |||||||||||| ||||||||
Sbjct 15760 TCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 15714
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | |||||||| || |||||||| || || ||||| || ||||||
Sbjct 15256 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 15197
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || || | || ||||| || ||
Sbjct 15196 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 15137
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||| || ||||||||||| | || || ||
Sbjct 15136 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACC 15077
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || || |||||||| ||||| || |||||
Sbjct 15076 TCGAGAGTGATGGTCTTGCCAGTAAGGGTCTTAACGAAGATTTGCAT 15030
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | ||||| || || || ||||| || || ||||| || || ||
Sbjct 15484 CCACCACGAAGACGGAGAACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAC 15425
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || |||
Sbjct 15424 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGA 15365
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||||||||| | ||||||| || ||||| || | || || ||
Sbjct 15364 ATGCCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCCACC 15305
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || || || || || || ||||||||||| ||||||||
Sbjct 15304 TCAAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 15258
Score = 127 bits (140), Expect = 4e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || || ||||| || |||||||| || ||||||
Sbjct 15028 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 14969
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | ||||| |||||||| || || | ||| ||||| || |||
Sbjct 14968 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 14909
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||| ||| ||| |||||||| || | || || ||
Sbjct 14908 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCAACC 14849
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||||||||| || || ||
Sbjct 14848 TCGAGGGTGATGGTCTTGCCAGT 14826
>seq475
Length=36479
Score = 125 bits (138), Expect = 1e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| || | |||||| || || || ||
Sbjct 18389 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATC 18330
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | ||| ||||| || ||||| || |||||||| || ||||| | |||||| |||
Sbjct 18329 AGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 18270
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| ||||| | || || || || | ||||||||| || ||||| | ||||||||||||
Sbjct 18269 ATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 18211
>seq1428
Length=2518
Score = 105 bits (116), Expect = 1e-17
Identities = 240/354 (68%), Gaps = 8/354 (2%)
Strand=Plus/Plus
Query 173099 AAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAAC 173158
|| |||||||| || | ||||| || || ||| |||| || ||| |||||||| |||
Sbjct 465 AACATTGACACCATCTTCCACTTCGCCGCCCAGTCCCACGTTGACCTGTCGTTCGGAAAC 524
Query 173159 TCGCTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGAGG 173218
||| | || ||| | |||||||||||| |||||||| || || || | || | |
Sbjct 525 TCGTACGGTTTCACCCACACCAACGTCTACGGCACCCACGTCCTGCTCGAGTCGGCCAAG 584
Query 173219 CTCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACGGCGAGAGC 173278
| | ||| || |||| |||||| | | || ||||| || || ||||| ||| |
Sbjct 585 ---AAGGTCGGCATCAAGCGCTTCATCCACATCTCCACCGATGAGGTCTACGGTGAGGTC 641
Query 173279 -AGTCTGGGCAAAAAAGAAGGCCTCGATGAACACTCGTCCCTCGAGCCAACAAACCCATA 173337
|| || | | | || |||||| || || | | ||||| || || ||||| ||
Sbjct 642 GAGGATGAG-GATGATGACCTCCTCGA-GACCA-GCAT-CCTCGCCCCCACCAACCCCTA 697
Query 173338 TGCAGCAGCCAAGGCTGGTGCCGAAATGATGGCACGTGCATATCACACATCGTACAAGCT 173397
|| || ||||||| | ||||| ||| ||| | | || || | | ||||||
Sbjct 698 CGCCGCCTCCAAGGCCGCCGCCGAGATGTTGGTGCACTCTTACCAGAAGAGTTTCAAGCT 757
Query 173398 ACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCCCGA 173451
|| |||||| | ||| ||||||| || || ||||| || |||||||||||
Sbjct 758 CCCCGTCATCATCGTCCGCAGCAACAACGTCTACGGCCCCCACCAGTTCCCCGA 811
>seq514
Length=32850
Score = 91.5 bits (100), Expect = 3e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGG 225505
|| |||||||| |||||||| || ||||| | |||| | | || || ||| |||
Sbjct 17476 TCGAGGAAGCCGGAGTCGTGAGAAACAATCAGCGACGTGATCTCGGTGTGGGTCTTCAGG 17417
Query 225506 TGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565
| | |||||| |||||| || |||| |||||| ||||||||||| |||||
Sbjct 17416 TACTCCTGGAGCCACTTGACGTTGGCAACATCCAAGTGGTTAGTAGGTTCGTCAAGAAGA 17357
Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625
|| | || || | || | || || | | |||| |||||||| ||||| || |||
Sbjct 17356 AGAACATCGGCCTTCATCAACATAGCCCTGGCAAGAGCGAGCTTCATCTTCCATCCACCG 17297
Query 225626 GACAGGGAGCCGA 225638
|||||||||||||
Sbjct 17296 GACAGGGAGCCGA 17284
Score = 89.7 bits (98), Expect = 9e-13
Identities = 146/208 (70%), Gaps = 8/208 (4%)
Strand=Plus/Minus
Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033
||| || |||||||||| |||||||||||| ||| | || || || |||||| || |
Sbjct 17951 GGCGTAACGCCACTGGAGGTACTGGTTGGGAGTCTTCTCGAGATGCATCTCAACGTGCTC 17892
Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093
| ||| ||||| | ||| | || |||| |||||| |||||| ||| |||
Sbjct 17891 AAGAGCGTGCTGCTTAATGTAACCAATACGCAAGTTGGGGTGCTTCTCAACACGGCC--- 17835
Query 225094 AGTCGGTTG----TGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCAT 225149
||| ||||| | |||||| || |||| ||||||||| || | ||| || ||||| |
Sbjct 17834 AGT-GGTTGGGATGGTCTCGCCAGTAAGGAGCTTGATGAGAGTGGACTTTCCGGCACCGT 17776
Query 225150 TGGGGCCAATCACGCCAATCCGGGATGA 225177
|| ||||| | | | | ||||| ||
Sbjct 17775 TGCCACCAATGATGGCCGTGCGGGAAGA 17748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921579947768200
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