Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq512 387 3e-102 seq3654 342 1e-88 >seq512 Length=30657 Score = 387 bits (428), Expect = 3e-102 Identities = 613/857 (72%), Gaps = 24/857 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || ||||||||| ||||||||||| || Sbjct 17448 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAGGAGATTGATCTC 17507 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415 |||||||| || |||| | || |||| | |||| || | ||| || Sbjct 17508 TCCAAGGACCTTCACGACTGGAACA-ACCGTCTCAACGACGATGAGCGCTACTTCATCTC 17566 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | || || |||||||||||||||||||| || ||||| |||||||| || | || Sbjct 17567 CCACGTTCTCGCTTTCTTCGCCGCCTCTGACGGAATTGTCAACGAGAACCT--CCTCGAG 17624 Query 42476 G--TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCC 42533 |||| | ||||| || | ||||| |||||||||||||| ||||| || Sbjct 17625 CGCTTCAGCAGTGAGGTCCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATG 17684 Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCC 42593 || |||||| | ||| | ||| ||| || || || |||| |||||| ||| | Sbjct 17685 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAG 17744 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653 | | || | || ||||| ||||| ||||| || || ||||| ||||||||||| Sbjct 17745 GCTCAACGCACATACCTCTTCAATGCCATCGAGACTATTCCTTGCATTAAGAAGAAGGCT 17804 Query 42654 GACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 |||||||| ||| |||||| | || | | | | || || | | || | || || || Sbjct 17805 GACTGGGCTGTCAGGTGGATCCA-AGACAAGGATTCTACCTTTGCCCAGCGTCTCGTTGC 17863 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 |||| ||||||||||||| ||||||||||| ||| ||||||| ||||| ||||||||||| Sbjct 17864 CTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCATCCATTTTCTGGCTCAA 17923 Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || || || ||| | || || |||||||||||||| |||||| | | ||||||| Sbjct 17924 GAAGCGTGGCCTC-ATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAGG 17982 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCG- 42890 | || || | ||||| ||||||||||| ||||| |||||||| |||| |||| | Sbjct 17983 GTCTCCACACTGACTTCGCCTGCCTCCTCTTCTC---CCACCTCAAGCAC-CGCCCAAGC 18038 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||| || |||| | | |||| || || ||||| |||||| |||||||| | || Sbjct 18039 AAGAAGGCCGTCCAAGACGTCATTACCGAAGCCGTCACCATCGAGCAGGAGTTCTTGACT 18098 Query 42951 CAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATG-TGCAAGTACATCC 43008 || | || ||| ||| | ||| ||||||||||| | || | ||| |||| ||||| Sbjct 18099 GAGGCACTTCCCTGTG-CTCTGCTCGGCATGAACGCCAACTTGATGAAGCAA-TACATTG 18156 Query 43009 AGTACGTCGCCGACCATCTCCTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCG 43067 ||| ||||||||| || ||| | | || || | |||||| || | Sbjct 18157 AGTTCGTCGCCGATAGACTGCTGCTTTCTCTCGGAAACGAGAAG-TACTACAAGTCGACC 18215 Query 43068 TGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAG 43127 ||| |||||||| |||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct 18216 AACCCATTCGACTTCATGGAGAACATCTCCCTGGCGGGCAAGACCAACTTCTTCGAGAAG 18275 Query 43128 CGCGTCGCCGACTACCA 43144 ||||||||||||||||| Sbjct 18276 CGCGTCGCCGACTACCA 18292 >seq3654 Length=7047 Score = 342 bits (378), Expect = 1e-88 Identities = 1120/1718 (65%), Gaps = 63/1718 (4%) Strand=Plus/Minus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| |||| |||| ||||| ||||||| |||| | ||||||||||||||||||||| Sbjct 4898 ACGGTGAATTGGATAGGTGCCGAGGCGGCCATGGTACGGAGGTAGTACATGCCGGTCTTG 4839 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || ||| ||| | | |||||||| || | ||| ||| || ||||| Sbjct 4838 AGGCCAAGCTTCCAACCAGCAAAGTGCATGGATGTGATCTTGCCCAT--TG----TTGGG 4785 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 || | | | || ||||||||||||| ||| || | ||||| | || || Sbjct 4784 TCCTTCATGTG------GATGTTGAGGGACTGGGACTGATCAATGAAGGCTCCACGGTCA 4731 Query 243917 GCGGCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 || ||||| || || ||| | ||| || ||||| | | |||||||||| || ||| Sbjct 4730 GCAGCCATCTGGACGATGGTACG-CTGGGAGATCTCCCAGACGGTCTTGTAGAGGGCCTT 4672 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || | |||| ||||||||| | ||||| || |||||| || | Sbjct 4671 GATGTCGGCAGGGATGTTGGGGATGTTCTGGATGGAGCCACCGTCCGCGATGATACGGTT 4612 Query 244036 GCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGA----CCAGGTGCCTGT 244091 |||||| || |||||| |||| | ||| ||| || ||||| | | Sbjct 4611 CTTCATGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTGAGCAACCAGGGG----T 4556 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 | || || || ||||| || | ||| || |||||| ||| | ||| | || |||| Sbjct 4555 TGACTACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTTCGAGGTGTATGGCT 4496 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 ||| | ||| || ||| || ||||| | ||| ||||| ||||| || | || | Sbjct 4495 CGAAACACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCATAGGAGCAACGA 4436 Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCT-GAGCTCGTTCCAGTCCCAC 244270 | ||| ||| | || |||||| || || | ||| || ||| || |||||||||| Sbjct 4435 GGAGAGAGTTGCGGACACCGTGCTGCTTTAT-CTGAGCCTTGAGAGAGTCCCAGTCCCAC 4377 Query 244271 ATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTG 244330 | || ||| | | | |||||||||||| |||| ||| ||||| Sbjct 4376 A-----GATCGGTAGGGG----TAACGCCCCACATGTCGTACTGGAGCTCTCCCTTCGAC 4326 Query 244331 ACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTC 244389 ||||| |||||||||||| ||| | |||| ||||||||||| || | Sbjct 4325 ACGGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCACGGAGGCG 4266 Query 244390 GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCC 244449 ||| | | | ||| ||| |||||||| |||||| ||| | | ||||| | Sbjct 4265 GTCAAAG-CACCGTGGTAAATGGTCTCAAAGATCTGAGAGTTGAGGAACTTGGCCTCGGG 4207 Query 244450 GCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCC 244509 | | ||| || | || | || ||| | || || || ||||| || || | | Sbjct 4206 GGAATCGAAAGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACCAACAGC 4147 Query 244510 GATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 | || ||||| || |||| ||| |||| || |||||||| ||||| |||| Sbjct 4146 AACTGGCCTGTGACGGAAGTTGCTGCGTCTGGCCTCCTCGACGGGGTAGTAGTTGACGTC 4087 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAAAGT 244628 || | |||||| | ||| | | || | | ||| ||| ||| ||| |||| Sbjct 4086 AATGATCTTGTTCAAGTT-CTTAACAACAACCTGTGTGACCTCGTGAAGCTTCTGGAAGT 4028 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTG--AGGGCGACGCT 244686 | || || | | | ||| ||| ||| | | |||| ||||| | | Sbjct 4027 CATA-----AGTGC-CGTTGGCCATG-------TCAACATAT-GTTGGCAGGGCAAGGGA 3982 Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 |||| |||||| ||||| ||||| || | | | ||||| ||||||||| ||||| || Sbjct 3981 TGCCAAGTTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCAAAG 3922 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 ||| || |||||| || |||| || || ||| |||| ||||||||| ||||| Sbjct 3921 GTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTT 3862 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||| |||||||| || || ||||| ||| | |||| | | || ||| || | Sbjct 3861 GTACAGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTT 3802 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 | ||||||| ||| ||||| |||| ||||| |||||||| ||| || ||||| Sbjct 3801 CTGGGCCTTGATGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCTCTCGTAGAGCGCCTC 3742 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTC 244984 ||||| ||| |||| || | | || ||||| || | |||||||||||| || Sbjct 3741 AAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTG--GGGCACATGAGAGTC 3684 Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044 || |||||| | || ||| | || ||||||||| || ||||||||||| || | ||| Sbjct 3683 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAC 3624 Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104 | ||| | || | || ||| || |||||| |||| |||| || |||||| Sbjct 3623 AAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAG 3564 Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164 || || ||||||| ||||| | ||||| |||| ||||| || ||||||||||| ||| Sbjct 3563 ACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTTGTTGCCACCC 3504 Query 245165 TGGTCCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGA 245223 ||||| || ||| | | | |||||||| || || |||| || || ||||| || Sbjct 3503 TGGTCAACGTATCTTGCAGTG-TTGTTGAAGACACGGAGCATAGGGACGATACCGTTCGA 3445 Query 245224 GTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCC 245283 || |||||||| || ||||| || || || | | || | ||| || || Sbjct 3444 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAATGTTCAATCC 3385 Query 245284 TAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTC 245343 | || || || ||| ||||| | ||| || |||||| ||||| || ||||| Sbjct 3384 GATGCCTCCAGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCCTC 3325 Query 245344 CATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCA 245403 || || ||| |||||||| || || |||||||| |||||||||| || | | || | Sbjct 3324 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCT--GTGGTGTA 3267 Query 245404 CGAG--TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 | || ||||| || || ||| ||||| || || || Sbjct 3266 CCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATA 3229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944295701375600