Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1689 95.1 1e-14 >seq1689 Length=16827 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968 || || || || ||||| ||||| ||||||||| ||||||||||| | || | || | Sbjct 15703 AGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGG 15644 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | |||| || | |||||||| || || |||||||||||||| ||| || | || ||| Sbjct 15643 C-CGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTC 15585 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 || || || || ||| | | | | |||| | || ||| ||| | ||| Sbjct 15584 CTTATCTTGGATCTTCGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGT 15525 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||||| |||||||| || || || || ||||||||||| Sbjct 15524 AATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397044567555370