Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 123 6e-23
seq347 109 1e-18
seq475 100 7e-16
seq512 91.5 3e-13
>seq1689
Length=16827
Score = 123 bits (136), Expect = 6e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || ||||| | ||| || || ||||| || || || |
Sbjct 15712 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGAC 15653
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || ||||| ||||| ||||| || || |||
Sbjct 15652 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGG---TCCGGG 15596
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || ||||| ||||| |||| || ||||| || || | ||| ||| ||
Sbjct 15595 GGAATGCCCTCCTTATCTTGGATCTTCGACTTGACGTTATCGATGGTATCCGACGACTCG 15536
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| || ||||| ||||| |||||||||||||| || |||||
Sbjct 15535 ACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15486
Score = 105 bits (116), Expect = 2e-17
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| ||||| || || ||||| || |||||| ||||| | || || || | ||
Sbjct 15916 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTCCAGCTGC 15857
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || || |||||||| ||||| || |||||| || || |||||||| || ||
Sbjct 15856 TTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTG 15797
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
| || ||||| || || | || || || || ||||| ||||| ||||| || |||
Sbjct 15796 GACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGAGTGATGGTCTTTCCAGTC 15737
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| ||||||||||| ||||||||
Sbjct 15736 AAGGTCTTGACGAAAATCTGCAT 15714
Score = 104 bits (114), Expect = 6e-17
Identities = 129/173 (75%), Gaps = 8/173 (5%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| ||||| || | ||| ||||| ||||||
Sbjct 14992 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAG 14933
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCAC 288398
|||||||| || || || ||| ||||| || || || ||||| || ||| || ||
Sbjct 14932 ATCAGACGTTGCTG---GTCCGGGGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTAAC 14877
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCA 288451
||| || || | |||| || || || ||||| ||||| ||||| || ||||
Sbjct 14876 GTTGTCGATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCA 14824
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||| | || ||||| || || || | || || || ||||||
Sbjct 15448 TCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAG 15389
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| ||||| || || || || || || || || || || | || |||||
Sbjct 15388 ATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGAATCTTGGACTTGACGTTG 15329
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||| || || || ||||| |||||||| || || ||||||||||||
Sbjct 15328 TCAATGGTATCCGACGACTCCACCTCAAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACG 15269
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 15268 AAAATCTGCAT 15258
>seq347
Length=76637
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || |||||||| || || | |||| ||| || || ||||| || ||||| |
Sbjct 19990 CCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 19931
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || || ||||||||||| ||||| || || |||
Sbjct 19930 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG---GTCCGGG 19874
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || |||||||| || | || || || || |||| ||| ||| ||
Sbjct 19873 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCC 19814
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| || ||||| ||||| ||||| || |||||
Sbjct 19813 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 19764
>seq475
Length=36479
Score = 100 bits (110), Expect = 7e-16
Identities = 132/182 (73%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| || |||||||| || || | || || || || ||||||
Sbjct 18389 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATC 18330
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || || || || ||| ||||| || || |||||||| |||| || || ||
Sbjct 18329 AGGCGTTGCTGG---TCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTG 18273
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| ||| ||| || || || || ||||| ||||| || |||| |||||||||
Sbjct 18272 TCGATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACG 18213
Query 288463 AA 288464
||
Sbjct 18212 AA 18211
>seq512
Length=30657
Score = 91.5 bits (100), Expect = 3e-13
Identities = 166/243 (68%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 269098 GAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGT 269157
||||| || || | ||| | |||||| | ||| || | || ||| || || ||||
Sbjct 18066 GAAGCCGTCACCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGTGCTCTGCTCGGC 18125
Query 269158 ATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCA 269217
||||| ||| | | ||||| ||||| || || ||||| || ||| | | | |
Sbjct 18126 ATGAACGCCAACTTGATGAAGCAATACATTGAGTTCGTCGCCGATAGACTGCTGCTTTCT 18185
Query 269218 CTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCG 269277
||||| | ||||| ||||| |||| || || |||| ||| ||||| || ||
Sbjct 18186 CTCGGAAACGAGAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACATCTCC 18245
Query 269278 CTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTA 269337
|| | || ||||| ||||||||||| ||||| ||| |||||| ||| |||||||
Sbjct 18246 CTGGCGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGGTGTC 18305
Query 269338 ATG 269340
|||
Sbjct 18306 ATG 18308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179598703723430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |