Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq514 107 4e-18 >seq514 Length=32850 Score = 107 bits (118), Expect = 4e-18 Identities = 200/294 (68%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 333698 GTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTT 333757 |||||||||| | ||||| || ||| ||||| |||| || || |||||||| Sbjct 17585 GTAGTAACTCTTAGCCTCGGGCTTCTGCTTGACGAAGTCGGCCAAGTTACCCTTGTAGCA 17526 Query 333758 CTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCC 333817 |||||| ||| ||||| ||| ||| ||||| || | |||||||| || Sbjct 17525 GGCCAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCAGTGCAGACCTCATCGAGGAAGCC 17466 Query 333818 GGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAG 333877 ||||||||| || ||||||| ||| | || | || | ||||||| || || Sbjct 17465 GGAGTCGTGAGAAACAATCAGCGACGTGATCTCGGTGTGGGTCTTCAGGTACTCCTGGAG 17406 Query 333878 CCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGC 333937 |||| | ||||| | ||| | ||||| || || ||||||||||| || | | || Sbjct 17405 CCACTTGACGTTGGCAACATCCAAGTGGTTAGTAGGTTCGTCAAGAAGAAGAACATCGGC 17346 Query 333938 GTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 |||| | ||| || | ||||||||||| ||||| ||||| || || || || Sbjct 17345 CTTCATCAACATAGCCCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 17292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102827928554750