Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3654 241 2e-58 seq512 149 7e-31 >seq3654 Length=7047 Score = 241 bits (266), Expect = 2e-58 Identities = 1110/1742 (64%), Gaps = 53/1742 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| || |||||||| || ||||||| || | ||||| || | Sbjct 4862 CGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAACCAGCAAAGTGCATGGATGTG 4803 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | |||||| | |||| || ||| | ||||| ||||| |||||| Sbjct 4802 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAG 4743 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773 |||||| || || ||||| | | | | | | || | || ||||| || || Sbjct 4742 GCTCCACGGTCAGCAGCCATCTGGACGA--TGGTACG-CTGGGAGATCTCCCAGACGGTC 4686 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 |||||||| ||| || || | ||||| | ||| || |||||||||||||| || Sbjct 4685 TTGTAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTCTGGATGGAGCCACCGTCC 4626 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCT----C 113889 || || | | |||||| | | ||||| ||||| || | | |||| | Sbjct 4625 GCGATGATACGGTTCTTCATGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTGAGC 4566 Query 113890 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 113949 || || | ||||| || ||||| || || ||| || | | || || || Sbjct 4565 AACCAGGGG----TTGACTACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTT 4510 Query 113950 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGG 114009 | ||||||||||| || ||||| ||| || | || |||| |||||| || ||||| Sbjct 4509 CGAGGTGTATGGCTCGAAACACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGG 4450 Query 114010 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGC 114069 ||| || || | ||| || ||| |||| ||| | | | | || | ||||||| | Sbjct 4449 CATAGGAGCAACGAGGAGAGAGTTGCGGACACCGTGCTGCTTTATCTGAGCCTTGAGAGA 4390 Query 114070 GTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTGCCACATATCAAACTGGAGGATAC 114125 ||||||||| | || | | || | ||| ||||| || ||||||| | Sbjct 4389 GTCCCAGTCCCACA-GATCGGTAGGGGTAACGCCC---CACATGTCGTACTGGAGCTCTC 4334 Query 114126 CTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC-- 114183 | | || | || |||||||| | |||||||||| ||| | || || |||| || Sbjct 4333 CCTTCGACACGGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCA 4274 Query 114184 -GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 114242 |||| | | | || |||| || || |||||||| || ||| || | || Sbjct 4273 CGGAGGCGGTC---AAAGCACCGTGGTAAATGGTCTCAAAGATCTGAGAGTTGAGGAACT 4217 Query 114243 TGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGA 114302 |||||||| |||||| || | || ||| | ||| |||| || ||||| |||| Sbjct 4216 TGGCCTCGGGGGAATCGAAAGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGA 4157 Query 114303 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAA 114362 |||| | ||| ||| | || | | || || || ||| ||||| || Sbjct 4156 CACCAACAGCAACTGGCCTGTGACGGAAGTTGCTGCGTCTGGCCTCCTCGACGGGGTAGT 4097 Query 114363 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 114422 | || || || | | | || | || || ||||||| ||||| || ||||||| Sbjct 4096 AGTTGACGTCAATGATCTTGTTCAAGTTCTTAACAACAACCTGTGTGACCTCGTGAAGCT 4037 Query 114423 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 114482 | | | | ||| || ||| | | | ||||| | || ||||| | || |||| Sbjct 4036 TCTGGAAGTCATAAGTGCCGTTGGCCATGTCAACATATGTTGGCAGGGCAAGGGATGCCA 3977 Query 114483 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 114542 || ||||| | |||||| ||| |||||| | ||| || || || | || | Sbjct 3976 AGTTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCAAAGGTTGG 3917 Query 114543 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 114602 | || ||||| || | |||||| || || ||| ||| || ||||||||||| | Sbjct 3916 AGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTACA 3857 Query 114603 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCG 114661 ||||| | || | || ||||| || || |||| |||||| | | ||| | | || | | Sbjct 3856 GCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGG 3797 Query 114662 GCTGGCACAGTGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCA 114718 || | ||| ||| | | ||||||| |||||| | |||||| || ||| Sbjct 3796 CCTTGA----TGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCTCTCGTAGAGCGCCTCA 3741 Query 114719 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCA 114777 ||||| || || | | || | | || || || || |||| || | ||||| ||| Sbjct 3740 AACTCATCGCCGTAGACGTCCGCCAAACCAGG-GCATTCGTTGGGGCACATGAGAGTCCA 3682 Query 114778 TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAG 114837 | || || ||| ||||||||||||||||| || |||||||||||||| |||| | Sbjct 3681 GTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAACAA 3622 Query 114838 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 114897 || || || |||| || | || || || | ||| |||| || || | || Sbjct 3621 GTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGAC 3562 Query 114898 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGC 114951 |||||||||||| || || | ||| | |||| | || | |||| ||| | Sbjct 3561 ATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCC---AGGACGCTTGTTGCCACC 3505 Query 114952 CTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGA 115011 ||||| || || || || ||| || || || || ||||| || | |||||| | || Sbjct 3504 CTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCGTTCGA 3445 Query 115012 TTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACC 115071 | || || || || ||| | | |||| | || | || |||| || || Sbjct 3444 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAATGTTCAATCC 3385 Query 115072 AATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTC 115131 || || || || ||||||||| || ||| | |||| || | ||||| || || Sbjct 3384 GATGCCTCCAGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCCTC 3325 Query 115132 GATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTAC 115190 || || |||| | ||| | ||||||| |||| || ||||| |||||||| Sbjct 3324 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTGGTGTAC 3266 Query 115191 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGG--GACATCTTATCGTA 115248 |||| |||||||| ||||| | ||||| |||| ||| |||| ||||| | ||| Sbjct 3265 CAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-ATA-TTTGGAAGACATGAGGTTGTA 3208 Query 115249 GGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 115308 ||||| | | ||| || || |||||||| || | | || ||||||| ||| Sbjct 3207 TGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCAT 3148 Query 115309 GT 115310 || Sbjct 3147 GT 3146 >seq512 Length=30657 Score = 149 bits (164), Expect = 7e-31 Identities = 344/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||||||||||||||||||||||||||| || ||||||||| ||| || | |||||| || Sbjct 17990 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 17931 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | ||||||||| | || || || ||||||||||| ||||| || Sbjct 17930 ACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGC 17871 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACTTCATCG 126236 || || |||| |||||||| ||||||| | | |||| | | |||| | | | Sbjct 17870 GGCAAAGGCAACGAGACGCTGGGCAAAGG-TAGAATCCTTGTCTTGGATCCACCTGACAG 17812 Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 126296 |||| | ||||| |||| || || || | |||| ||| || | ||||| | | Sbjct 17811 CCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTGAAGAGGTATGTGC 17752 Query 126297 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 126356 || | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 17751 GTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 17692 Query 126357 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 126415 | || || ||| || || ||||||| |||| || || || || |||||| | Sbjct 17691 TCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCCTCTGGGATTTGGACCTCA-CT 17634 Query 126416 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 126474 || || | | || ||||| |||||||| || || | || || || || || Sbjct 17633 GCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCGAAGAAAGCGAG 17574 Query 126475 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATC 126531 | | ||||| | | |||| ||||| | || | |||||||||| ||| || Sbjct 17573 AACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAGTCGTGAAGGTC 17514 Query 126532 CTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||| |||||||| | |||||| || ||||| Sbjct 17513 CTTGGAGAGATCAATCTCCTCTGCGGTCCA 17484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597326084399800