Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3654 297 2e-75 >seq3654 Length=7047 Score = 297 bits (328), Expect = 2e-75 Identities = 1086/1672 (65%), Gaps = 40/1672 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || || ||| ||| ||||| ||| | |||||| Sbjct 3064 AACTACCAATACTTTGGCTTCAAGACCCTTGAGCGGTCCTACCTTCTCCGCCTTGATGGC 3123 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| | ||| | ||||| || || | ||||| || ||| | || ||||||||| | Sbjct 3124 AAGGTTGCTGAGAGGCCGCAGCACATGATTATGCGTGTTGCCGTTGGCATTCACGGCGAG 3183 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 || || ||| | | | | || |||| ||| | || || Sbjct 3184 GATATTGAGAAGACCATCGAGACATACAACCTCATGTCTTCCAAATATTTCACACACGCT 3243 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 |||| || || ||||| || || || || | | ||| |||| || || ||| || | Sbjct 3244 TCCCCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTC 3303 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| || || || || | |||| |||||| ||||| | || Sbjct 3304 GAC-ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACGTGTGCCATGAT 3362 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071 |||||| || || || ||||| | | | ||| |||| ||||||| ||| | Sbjct 3363 CTCAAAGACTGCTGGAGGCATCGGATTGAACATTCAC--CGTATCCGTGCCACTGGTGCA 3420 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||||||||| || | ||| ||||| |||||||||||||||| ||||||||| Sbjct 3421 TACATTGCCGGTACCAACGGAAACTCGAACGGTATCGTCCCTATGCTCCGTGTCTTCAAC 3480 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || | ||||| ||||||||||| | | | || ||||||| |||| Sbjct 3481 AACACTGCAAGATACGTTGACCAGGGTGGCAACAAGCGTCCTGGCGCTTTCGCCATCTAC 3540 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 ||||||| ||||||||||| || | ||| | ||| || ||||||||||||| || Sbjct 3541 GTCGAGCCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAG 3600 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | ||| | ||| | ||||||||||||||| | || || || || ||||| Sbjct 3601 GAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCTGATCTCTTCATGAAG 3660 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || |||||||| ||| || ||||| ||| | || ||||| ||||| || || || | Sbjct 3661 CGTGTCGAGAAGAACGGCGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGTTTGGCG 3720 Query 94372 GACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 ||||| | | ||| | | ||||| | | || | | ||||| | |||| |||| Sbjct 3721 GACGTCTACGGCGAT-GAG-TTTGAGGCGCTCTACGAGAGCTACGAGAAGGAGGGTAAGG 3778 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | ||| || | || |||||| ||| | || | || ||| |||| Sbjct 3779 GTCGCAAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGA 3838 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || | || | ||| ||| |||||| | |||| |||| ||||||| || ||| Sbjct 3839 CAGGAAACCCTTTCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACC 3898 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 |||| ||| ||||| || || ||||| |||||||||||||| || | || || | Sbjct 3899 TCGGTACCATCCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCCCCAGATG 3958 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACA 94669 || |||| ||||| ||| ||| ||| | |||| | || | || || ||| | | | Sbjct 3959 AGGTTGCCGTGTGCAACTTGGCATCCCTTGCCCTGCCAACATATGT-TGACATGGCCA-A 4016 Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT-- 94727 || | ||| | || | || ||||| | || | ||| || | || Sbjct 4017 CGGC-ACT------TATGACTTCCAGAAGCTTCACGAGGTCAC--ACAGGTTGTTGTTAA 4067 Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA-- 94785 |||| |||||| | | || ||| |||| |||||||||| |||||| || || || Sbjct 4068 GAACTTGAACAAGATCATTGACGTCAACTACTACCCCGTCGAGGAGGC-CAG-ACGCAGC 4125 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| | || |||| | | | || ||||||||| | || || || | || Sbjct 4126 AACTTCCGTCACAGGCCAGTTGCTGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCT 4185 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTT--TGAATTTGAACATATTCGAAA 94903 | || || || | ||| || ||| || | ||| | || | | || || || | Sbjct 4186 CTCCGCCTTCCTTTCGATTCCCCCGAGGC--CAAGTTCCTCAACTCTCAGATCTTTGAGA 4243 Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCGGGCCA 94962 |||||| |||| || ||| ||||| | || | |||||| ||||| || Sbjct 4244 CCATTTACCACGGTGCTTTGACCGCCTCCGTGGAGCTGGCCCAGAT-TCACGGC---ACA 4299 Query 94963 CACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGT 95022 |||| | | | ||||| ||| || |||| | |||| |||| | ||||| Sbjct 4300 TACGAGACCTACGAGGGATCTCCCGTGTCGAAGGGAGAGCTCCAGTACGACATGTGGGGC 4359 Query 95023 GTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGT 95082 || | || | | ||||| |||||||| |||| ||| | | | | |||||| Sbjct 4360 GTTACCCCTACCGATCTGTGGGACTGGGACTCTCTCAAGGCTCAGATAAAGCAGCACGGT 4419 Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142 || ||| | || || || || || |||||||| || ||||| | ||||| || ||| Sbjct 4420 GTCCGCAACTCTCTCCTCGTTGCTCCTATGCCCACTGCTTCCACCTCCCAGATTCTCGGC 4479 Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202 |||||||| ||||| || | |||||| ||| | ||| | || || || || || Sbjct 4480 TTCAACGAGTGTTTCGAGCCATACACCTCGAACATTTACTCGCGCCGTGTCCTGGCTGGC 4539 Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGG 95261 || |||| || ||||| | || |||| | | || | ||||| ||||| Sbjct 4540 GAGTTCCAAGTAGTCAACCCCTGGTTGCTCAAGGACTTGGTCGAC-ATGGGTCTGTGGTC 4598 Query 95262 TGACAAGGTCAAGAACCAACTGCTACGC-GCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320 |||||| | ||||||| | | ||| | | |||||| ||||||||||||| | | Sbjct 4599 TGACAACATGAAGAACCGTAT-CATCGCGGACGGTGGCTCCATCCAGAACATCCCCAACA 4657 Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 | || | ||||||||||| |||||||||||||| ||||||||| | ||||| Sbjct 4658 TCCCTGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCG 4709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494700411812600