Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 120 3e-22
seq512 109 5e-19
seq347 95.1 1e-14
>seq1689
Length=16827
Score = 120 bits (132), Expect = 3e-22
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | ||| ||||| | | |||||||| |||||||||||||| |
Sbjct 15484 CCACCACGAAGACGGAGAACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAC 15425
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| || || ||||| | |||| || ||||| |||||||||||
Sbjct 15424 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGA 15365
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| ||| | || | || | ||| || | ||| || | ||||||||
Sbjct 15364 ATGCCCTCCTTGTC-TTGAATCTTGGACTTGACGTTG-TCAATGGTATCCGACGACTCCA 15307
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | ||| | ||| || ||||| ||||| || || |||||||||||
Sbjct 15306 CCTCAAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 15258
Score = 105 bits (116), Expect = 7e-18
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAAT 138481
|||||| || |||||||||||||||| || | || | ||||| || || ||||| | |
Sbjct 15905 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCA-TCCTCCAGCTGCTTACCAGCAA 15847
Query 138482 AGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-- 138539
|||| || ||||| |||||||| || ||||| || || || ||| | || | || |
Sbjct 15846 AGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATC-CTGAATCTTGGACTTGACG 15788
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||| | ||||| ||||||| || | || || ||||||| || ||
Sbjct 15787 TTG-TCGATGGTGTCCGAAGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTT 15729
Query 138600 TACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 15728 GACGAAAATCTGCAT 15714
Score = 102 bits (112), Expect = 8e-17
Identities = 141/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||| | ||| || ||||| || || || || | |
Sbjct 15223 GACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCA 15164
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| || ||||| |||||||| || || || || ||||| ||| || || | |
Sbjct 15163 AAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTCACA 15104
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||||| |||||| ||||||| || | || || ||||| || || ||
Sbjct 15103 TTG-TCGATGGTGTCGGACGACTCAACCTCGAGAGTGATGGTCTTGCCAGTAAGGGTCTT 15045
Query 138600 TACAAAAATCTGCAT 138614
|| || || |||||
Sbjct 15044 AACGAAGATTTGCAT 15030
Score = 89.7 bits (98), Expect = 5e-13
Identities = 146/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | || || || | | | |||||||| || ||||||||||||
Sbjct 15028 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 14969
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||| ||||| || |||| |||| ||||| || |||||||| ||
Sbjct 14968 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 14909
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| || | || | |||| ||| || | ||| |||| ||||| |
Sbjct 14908 ATTCCCTCCTTGTC-TTGGATCTTGCTCTTAACGTTG-TCGATGGTATCGGAGGACTCAA 14851
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCA 138592
|||||| || | || || |||||||
Sbjct 14850 CCTCGAGGGTGATGGTCTTGCCAGTCA 14824
>seq512
Length=30657
Score = 109 bits (120), Expect = 5e-19
Identities = 488/759 (64%), Gaps = 17/759 (2%)
Strand=Plus/Plus
Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145
||||| || |||||||| || ||| ||||| | || |||||||||||| | || |
Sbjct 17541 AACGACGATGAGCGCTACTTCATCTCCCACGTTCTCGCTTTCTTCGCCGCCTCTGACGGA 17600
Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCA 52204
|| || ||| |||||| ||||| | | |||| | | ||| | | | ||||| |
Sbjct 17601 ATTGTCAACGAGAACCTCCTCGAGCGCTT-CAGCAGTGAGGTCCAAATCCCAGAGGCCCG 17659
Query 52205 ATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCT 52264
| ||| || ||| ||| | | |||||| | | ||| | |||| ||| || ||
Sbjct 17660 CTGCTTCTACGGTTTCCAAATCATGATCGAGAACATTCACGCCGAGACATACTCCCTCCT 17719
Query 52265 CATTGAGCAGCTG-ATAAAAGATGAGCACGAGCGCG-ACACGCTGCTGAATGCGTTCGAG 52322
||| || || | || || || || | ||| | || || | ||||| |||||
Sbjct 17720 CATCGA-CACATACATCAAGGAGCAGGCTCAACGCACATAC-CTCTTCAATGCCATCGAG 17777
Query 52323 CACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACC 52382
| || ||| || || |||||| | ||||| | | ||||||| | ||||
Sbjct 17778 ACTATTCCTTGCATTAAGAAGAAGGCTGACTGGGCTGTCAGGTGGATCCAA---GACAAG 17834
Query 52383 G---CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCC 52439
| | || | ||| |||| | || ||||| ||| |||||||| | || || |||
Sbjct 17835 GATTCTACCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCC 17894
Query 52440 GGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTC 52499
||| ||| || |||| || | | || | | ||| | ||| | |||||||| |||
Sbjct 17895 GGCTCCTTCGCATCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTC 17954
Query 52500 AGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTAC 52559
|||||| | || || || ||||| || || ||||| ||||| || |||||| || |
Sbjct 17955 TCGAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTC 18014
Query 52560 AAGACGCGCGTG-ACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGC 52618
| | | |||| || | | | | || | || | | | | || ||
Sbjct 18015 TCCCACCTCAAGCACCGCCCAA--GCAAGAAGGC-CGTCCAAGA-CGTCATTACCGAAGC 18070
Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678
|| | ||||| ||||||| || || | || || || | ||||| ||||||||
Sbjct 18071 CGTCACCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGTGCTCTGCTCGGCATGAA 18130
Query 52679 CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738
||| | | ||| | ||||| ||||| || || ||| | ||| || | |||||
Sbjct 18131 CGCCAACTTGATGAAGCAATACATTGAGTTCGTCGCCGATAGACTGCTGCTTTCTCTCGG 18190
Query 52739 GCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGA 52798
| ||||||| ||| | ||| || || || || ||| | ||||| || || |
Sbjct 18191 AAACGAGAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACATCTCCCTGGC 18250
Query 52799 GGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||||||||||||| ||||||||||| |||| ||| ||
Sbjct 18251 GGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTA 18289
>seq347
Length=76637
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| | ||||| |||||||| || || ||||
Sbjct 19957 GACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCG 19898
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| || ||||| |||||||| || || || || ||||| ||| || || | |
Sbjct 19897 AAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACA 19838
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | ||||||| |||||||||||| | || | || || || ||||| || ||
Sbjct 19837 TTG-TCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTT 19779
Query 138600 TACAAAAATCTGCATGGCT 138618
|| || || |||||| ||
Sbjct 19778 CACGAAGATTTGCATGACT 19760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496239540913200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |