Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 105 6e-18
>seq1689
Length=16827
Score = 105 bits (116), Expect = 6e-18
Identities = 166/233 (71%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| ||||| || ||||| ||||| || |||||
Sbjct 15715 ATACCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCA 15656
Query 45171 CTGACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| | | | || || | || || || ||| | |||| || ||||||||||
Sbjct 15655 --GACAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCG 15598
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287
| |||||||| || |||||||| || || |||| || | || | ||| || || |||
Sbjct 15597 GGGGAATGCCCTCCTTATCTTGGATCTTCGACTTGA-CGTTATCGATGGTATCCGACGAC 15539
Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| || |||| || || ||||| ||||| || || || ||||||||
Sbjct 15538 TCGACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15486
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
|||||| || || ||||| || || || || || | ||| ||| |||| ||
Sbjct 15461 ATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAGCTG 15402
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
|| || ||| | |||| || ||||||||||| |||||||| || || |||||||| ||
Sbjct 15401 CTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGAATCTT 15342
Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
|||| || | || | ||| || || ||||| || || || |||| ||| ||||| |
Sbjct 15341 GGACTTGA-CGTTGTCAATGGTATCCGACGACTCCACCTCAAGCGTAATCGTCTTGCCAG 15283
Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| || || ||||| |||||
Sbjct 15282 TAAGAGTCTTGACGAAAATCTGCAT 15258
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||| ||||| || || ||||| | || | ||| |||| || || || || |
Sbjct 15904 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAAG 15845
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
|||| || ||||||||||| || || || || ||||| ||||| || |||| || |
Sbjct 15844 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 15786
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | |||||| |||||||| || |||||||| | || || || || | || || ||
Sbjct 15785 GTCGATGGTGTCCGAAGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGAC 15726
Query 45329 AAAAATTTGCAT 45340
||||| |||||
Sbjct 15725 GAAAATCTGCAT 15714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451982379602600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |