Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3654 219 5e-52 seq512 149 8e-31 >seq3654 Length=7047 Score = 219 bits (242), Expect = 5e-52 Identities = 1107/1741 (64%), Gaps = 51/1741 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| || ||||||| || | ||||| || | Sbjct 4862 CGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAACCAGCAAAGTGCATGGATGTG 4803 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | |||||| | |||| || ||| | ||||| ||||| |||||| Sbjct 4802 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAG 4743 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 115734 ||| || || || ||||| | | | | | | || | || ||||| || || Sbjct 4742 GCTCCACGGTCAGCAGCCATCTGGACGA--TGGTACG-CTGGGAGATCTCCCAGACGGTC 4686 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 |||||||| ||| || || | ||||| | ||| || ||||| |||||||| || Sbjct 4685 TTGTAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTCTGGATGGAGCCACCGTCC 4626 Query 115795 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCT----C 115850 || || | | |||||| | | ||||| ||||| || | | |||| | Sbjct 4625 GCGATGATACGGTTCTTCATGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTGAGC 4566 Query 115851 CACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910 || ||| | ||||| || ||||| || || ||| || | | || ||||| Sbjct 4565 AACCAGGGG----TTGACTACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTT 4510 Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970 | ||||||||||| || ||||| ||| || | || |||| ||||| || ||||| Sbjct 4509 CGAGGTGTATGGCTCGAAACACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGG 4450 Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030 ||| || || | ||| || |||||||| ||| | | | || | ||||||| | Sbjct 4449 CATAGGAGCAACGAGGAGAGAGTTGCGGACACCGTGCTGCTTTATCTGAGCCTTGAGAGA 4390 Query 116031 GTCCCAGTCGTAGTTGAGCTTT--GTCTCCCCCTCCCACATATCAAACTGGAGGATACCT 116088 ||||||||| | || | | | | | | ||||||| || ||||||| || Sbjct 4389 GTCCCAGTCCCACA-GATCGGTAGGGGTAACGC-CCCACATGTCGTACTGGAGCTCTCCC 4332 Query 116089 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC---G 116145 | ||| | || |||||||| | ||||| |||| ||| | || || |||| || | Sbjct 4331 TTCGACACGGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCACG 4272 Query 116146 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTG 116205 ||| | | | || |||| || || |||||||| || ||| || | |||| Sbjct 4271 GAGGCGGTC---AAAGCACCGTGGTAAATGGTCTCAAAGATCTGAGAGTTGAGGAACTTG 4215 Query 116206 GCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACA 116265 |||||| |||||| || | || ||| | ||| |||| || ||||| |||||| Sbjct 4214 GCCTCGGGGGAATCGAAAGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACA 4155 Query 116266 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 116325 || | ||| ||| | || | | || || || ||| ||||| || | Sbjct 4154 CCAACAGCAACTGGCCTGTGACGGAAGTTGCTGCGTCTGGCCTCCTCGACGGGGTAGTAG 4095 Query 116326 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 116385 || || || | | | || | || || ||||||| ||||| || |||||||| Sbjct 4094 TTGACGTCAATGATCTTGTTCAAGTTCTTAACAACAACCTGTGTGACCTCGTGAAGCTTC 4035 Query 116386 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 116445 | | | ||| || ||| | | | ||||| | || ||||| | || |||| Sbjct 4034 TGGAAGTCATAAGTGCCGTTGGCCATGTCAACATATGTTGGCAGGGCAAGGGATGCCAAG 3975 Query 116446 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 116505 || ||||| | |||||| ||| |||||| | ||| || || || | || || Sbjct 3974 TTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCAAAGGTTGGAG 3915 Query 116506 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGC 116565 || ||||| || | |||||| || || ||| ||| || ||||||||||| ||| Sbjct 3914 CTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTACAGC 3855 Query 116566 ATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGC 116624 || | || | || ||||| || || |||| |||||| | | ||| | | || | | | Sbjct 3854 ATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCC 3795 Query 116625 TGGCACAGTGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAA 116681 | | ||| ||| | | ||||||| |||||| | |||||| |||||||| Sbjct 3794 TTGA----TGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCTCTCGTAGAGCGCCTCAAA 3739 Query 116682 CTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCATT 116740 ||| || || | || | | || || || || | || || | ||||| ||| | Sbjct 3738 CTCATCGCCGTAGACGTCCGCCAAACCAGG-GCATTCGTTGGGGCACATGAGAGTCCAGT 3680 Query 116741 GACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGAT 116800 || || ||| || |||||||||||||| || ||||||||||| || |||| | | Sbjct 3679 CGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAACAAGT 3620 Query 116801 CCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 116860 | || || |||| || | || || || | ||| |||| || || | || || Sbjct 3619 CACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACAT 3560 Query 116861 CCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTGCGACGACCAGCCT 116914 |||||||||| || || | ||| | |||| | || |||| ||| ||| Sbjct 3559 CCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTTG---TTGCCACCCT 3503 Query 116915 GGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATT 116974 ||| || || || || || ||| || || || ||||| || | |||||| | || | Sbjct 3502 GGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCGTTCGAGT 3443 Query 116975 GGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGTGCATACCA 117033 || || || || ||| | || | |||| | || | ||| |||| || || Sbjct 3442 TTCCGTTGGTACCGGCAATGTATGCACCAG-TGGCACGGATACGGTGAATGTTCAATCCG 3384 Query 117034 ATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 117093 || || || || ||||||||| || ||| | |||| || | ||||| || || Sbjct 3383 ATGCCTCCAGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCCTCA 3324 Query 117094 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACC 117152 || || |||| | ||| | ||||||| |||| || ||||| ||||||||| Sbjct 3323 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTGGTGTACC 3265 Query 117153 AGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGG--GACATCTTATCGTAG 117210 ||| |||||||| ||||| | ||||| |||| ||| |||| ||||| | ||| Sbjct 3264 AGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-ATA-TTTGGAAGACATGAGGTTGTAT 3207 Query 117211 GTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATG 117270 ||||| | | ||| || || |||||||| || | | || ||||||| |||| Sbjct 3206 GTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCATG 3147 Query 117271 T 117271 | Sbjct 3146 T 3146 >seq512 Length=30657 Score = 149 bits (164), Expect = 8e-31 Identities = 344/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||||||||||||||||||||||||||| || ||||||||| ||| || | |||||| || Sbjct 17990 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 17931 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | ||||||||| | || ||||| ||||||||||| ||||| || Sbjct 17930 ACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGC 17871 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709 || || |||| ||||||| |||||||| | | |||| | | |||| | | | Sbjct 17870 GGCAAAGGCAACGAGACGCTGGGCAAAGG-TAGAATCCTTGTCTTGGATCCACCTGACAG 17812 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 127769 |||| | ||||| |||| || || || | |||| ||| || | ||||| | | Sbjct 17811 CCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTGAAGAGGTATGTGC 17752 Query 127770 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 127829 || | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 17751 GTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 17692 Query 127830 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 127888 | || || ||| || || ||||||| |||| || || || || |||||| | Sbjct 17691 TCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCCTCTGGGATTTGGACCTCA-CT 17634 Query 127889 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 127947 || || | | || ||||| |||||||| || || | || || || || || Sbjct 17633 GCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCGAAGAAAGCGAG 17574 Query 127948 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATC 128004 | | ||||| | | |||| ||||| | || | |||||||||| || || Sbjct 17573 AACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAGTCGTGAAGGTC 17514 Query 128005 CTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||| |||||||| | |||||| || ||||| Sbjct 17513 CTTGGAGAGATCAATCTCCTCTGCGGTCCA 17484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613478940324600