Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq512 167 4e-36
seq3654 141 1e-28
>seq512
Length=30657
Score = 167 bits (184), Expect = 4e-36
Identities = 550/841 (65%), Gaps = 23/841 (3%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| ||||||||||||||| ||| ||| || |||||||| ||||||||||
Sbjct 18275 CTTCTCGAAGAAGTTGGTCTTGCCCGCCAGGGAGATGTTCTCCATGAAGTCGAATGGGTT 18216
Query 159709 CTTC-ACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767
|| || || ||| |||| |||||||| ||||| || || || || || |
Sbjct 18215 GGTCGACTTG-TAGTACTTCTCGTTTCCGAGAGAAAGCAGCAGTCTATCGGCGACGAACT 18157
Query 159768 CGATGTA--GCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTC 159825
| ||||| ||| || || | ||| || || ||||| | ||| || || ||
Sbjct 18156 CAATGTATTGCTTCA--TCAAGTTGGCGTTCATGCCGAGCAGAGCACAGGGAAGTGCCTC 18099
Query 159826 CGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACA-CGTTCGT 159884
| || ||||||| ||| || ||| |||||||| | | | ||| | ||| |
Sbjct 18098 AGTCAAGAACTCCTGCTCGATGGTGACGGCTTCGGTAATGACGTCTTGGACGGCCTTCTT 18039
Query 159885 ACCCCGGCT-TGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943
| ||| ||| || ||| || |||||||| || ||||| ||| ||
Sbjct 18038 GCTTGGGCGGTGCT-----TGAGGTGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGA 17984
Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003
|||||||| || ||||||| |||||| || | | | ||||| | ||||| ||||||
Sbjct 17983 CCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCCACGCTTC 17924
Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063
|||||||| ||||||| || || | ||| || ||||| ||||| ||||| |||||
Sbjct 17923 TTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCAAAG 17864
Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123
|| ||||| | || |||| | | | |||| ||| ||||||| ||||| |||
Sbjct 17863 GCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGGATCCACCTGACAGCCCAGTCA 17804
Query 160124 GCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA---ATCTGTCCTGCTCC 160180
|||||||| ||||| || || ||||| ||| || || | || || || ||
Sbjct 17803 GCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCC 17744
Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240
| | |||||||| || | || || ||||| | || ||||| | || |||
Sbjct 17743 TGC---TCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCG 17687
Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTC-CTGTGTGAA 160299
|| || || || |||||| | ||||| | || ||||| ||| ||||
Sbjct 17686 ATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATTTGGACCTCACTG-CTGAA 17628
Query 160300 CCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTG 160359
| | || || | || || | ||||| | ||| || |||||||| | |||||
Sbjct 17627 GCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCGAAGAAAGCGAGAACGTG 17568
Query 160360 AGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGG 160418
|||||||| | | ||| || | |||||| | || | ||||| ||| | ||| | ||
Sbjct 17567 GGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAGTCGTG-AAGGTCCTTGG 17509
Query 160419 CCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGA 160478
| ||||| ||| || ||| |||| | |||| || | |||||||| |||||
Sbjct 17508 AGAGATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTTCTTGTACATCTGCCAGA 17449
Query 160479 T 160479
|
Sbjct 17448 T 17448
>seq3654
Length=7047
Score = 141 bits (156), Expect = 1e-28
Identities = 322/475 (68%), Gaps = 26/475 (5%)
Strand=Plus/Minus
Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990
|| |||||| ||||||||| |||| |||||||||| |||||| || |||| ||||
Sbjct 3894 CTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTC 3835
Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACG 205045
||||||| ||| |||||| | ||| | | | |||| | ||||| | |
Sbjct 3834 AGTCTGAGACTCG-AGAATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCT 3776
Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCC 205105
||| |||| |||||| | ||| |||||| |||| ||| ||||| ||||||
Sbjct 3775 TACCCTCCTT----CTCGTAGCTCTCGTAGAGCGCCTCAAACTCATCGCCGTAGACGTCC 3720
Query 205106 ATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCT 205164
|| || || |||| ||||| ||||| |||| ||| | | || ||| || |
Sbjct 3719 GCCAAACCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCG-ACACG 3661
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|| ||| || || || |||||| || |||| |||| |||||||| | | | | ||
Sbjct 3660 CTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTC 3601
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATG---TCGGCGTGCCACGGCTC 205281
| ||| |||||||| |||||||||| | | ||| | || |||||||| |||||
Sbjct 3600 CTTTCCGTGGTTCTTTCTCAAGTCCAGGAA---CTCAAAGACATCCGCGTGCCATGGCTC 3544
Query 205282 TAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC----CATGCGAG 205337
| | | ||| | ||||| || | |||||| ||||||||||| || | ||| ||
Sbjct 3543 GACGTAGATGGCGAAAGCGCCAGGACGCTTGTTGCCACCCTGGTCAACGTATCTTGC-AG 3485
Query 205338 TCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392
| | |||||| || || ||||| || || | |||||| | | | ||||| ||
Sbjct 3484 TGTT---GTTGAAGACACGGAGCATAGGGACGATACCGTTCGAGTTTCCGTTGGT 3433
Score = 125 bits (138), Expect = 1e-23
Identities = 345/521 (66%), Gaps = 6/521 (1%)
Strand=Plus/Minus
Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944
|| ||||||||||||||||| ||||| || ||| || | ||||||||| | |
Sbjct 4859 AGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAACCAGCAAAGTGCATGGATGTGATC 4800
Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004
|||| || | ||||| |||||| ||||| || |||||| || || ||| |||||
Sbjct 4799 TTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATG-AAGGC 4741
Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063
|| || || || ||||| | || ||||| ||| || |||||||| || |||||| |
Sbjct 4740 TCCACGGTCAGCAGCCATCTGGACGATGGTACGCTGGGAGATCTCCCAGACGGTCTTGTA 4681
Query 204064 CACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCA 204122
| | | || ||| ||| | | | | || || ||| ||||| ||| || |
Sbjct 4680 GAGGGCCTTGATGTCGGCAGGGATGT-TGGGGATGTTCTGGATGGAGCCACCGTCCGCGA 4622
Query 204123 TCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGT 204182
| | | || || | | || ||||| |||| || || ||| | ||
Sbjct 4621 TGATACGGTTCTTCATGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTGAGCAACC 4562
Query 204183 GGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGA 204242
|||||||| | || || || || | ||| || | || | | | | ||| ||||
Sbjct 4561 AGGGGTTGACTACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTTCGAGGTGT 4502
Query 204243 ATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAG 204302
|||| ||||| ||||||| ||||| |||||| | |||| || |||||||| ||||
Sbjct 4501 ATGGCTCGAAACACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCATAGGAG 4442
Query 204303 CCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCG-CTTCAGAGAGGTCCAG 204361
| | ||| || |||||||| ||||||| | | | ||| | ||| |||||| ||||
Sbjct 4441 CAACGAGGAGAGAGTTGCGGACACCGTGCTGCTTTA-TCTGAGCCTTGAGAGAGTCCCAG 4383
Query 204362 TCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTG 204402
|| || | | || | ||||||||||||||| ||||
Sbjct 4382 TCCCACAGATCGGTAGGGGTAACGCCCCACATGTCGTACTG 4342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795118573163600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |