Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq512 167 4e-36 seq3654 141 1e-28 >seq512 Length=30657 Score = 167 bits (184), Expect = 4e-36 Identities = 550/841 (65%), Gaps = 23/841 (3%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| ||||||||||||||| ||| ||| || |||||||| |||||||||| Sbjct 18275 CTTCTCGAAGAAGTTGGTCTTGCCCGCCAGGGAGATGTTCTCCATGAAGTCGAATGGGTT 18216 Query 159709 CTTC-ACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 || || || ||| |||| |||||||| ||||| || || || || || | Sbjct 18215 GGTCGACTTG-TAGTACTTCTCGTTTCCGAGAGAAAGCAGCAGTCTATCGGCGACGAACT 18157 Query 159768 CGATGTA--GCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTC 159825 | ||||| ||| || || | ||| || || ||||| | ||| || || || Sbjct 18156 CAATGTATTGCTTCA--TCAAGTTGGCGTTCATGCCGAGCAGAGCACAGGGAAGTGCCTC 18099 Query 159826 CGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACA-CGTTCGT 159884 | || ||||||| ||| || ||| |||||||| | | | ||| | ||| | Sbjct 18098 AGTCAAGAACTCCTGCTCGATGGTGACGGCTTCGGTAATGACGTCTTGGACGGCCTTCTT 18039 Query 159885 ACCCCGGCT-TGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943 | ||| ||| || ||| || |||||||| || ||||| ||| || Sbjct 18038 GCTTGGGCGGTGCT-----TGAGGTGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGA 17984 Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 |||||||| || ||||||| |||||| || | | | ||||| | ||||| |||||| Sbjct 17983 CCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCCACGCTTC 17924 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 |||||||| ||||||| || || | ||| || ||||| ||||| ||||| ||||| Sbjct 17923 TTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCAAAG 17864 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 || ||||| | || |||| | | | |||| ||| ||||||| ||||| ||| Sbjct 17863 GCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGGATCCACCTGACAGCCCAGTCA 17804 Query 160124 GCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA---ATCTGTCCTGCTCC 160180 |||||||| ||||| || || ||||| ||| || || | || || || || Sbjct 17803 GCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCC 17744 Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 | | |||||||| || | || || ||||| | || ||||| | || ||| Sbjct 17743 TGC---TCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCG 17687 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTC-CTGTGTGAA 160299 || || || || |||||| | ||||| | || ||||| ||| |||| Sbjct 17686 ATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATTTGGACCTCACTG-CTGAA 17628 Query 160300 CCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTG 160359 | | || || | || || | ||||| | ||| || |||||||| | ||||| Sbjct 17627 GCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCGAAGAAAGCGAGAACGTG 17568 Query 160360 AGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGG 160418 |||||||| | | ||| || | |||||| | || | ||||| ||| | ||| | || Sbjct 17567 GGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAGTCGTG-AAGGTCCTTGG 17509 Query 160419 CCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGA 160478 | ||||| ||| || ||| |||| | |||| || | |||||||| ||||| Sbjct 17508 AGAGATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTTCTTGTACATCTGCCAGA 17449 Query 160479 T 160479 | Sbjct 17448 T 17448 >seq3654 Length=7047 Score = 141 bits (156), Expect = 1e-28 Identities = 322/475 (68%), Gaps = 26/475 (5%) Strand=Plus/Minus Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990 || |||||| ||||||||| |||| |||||||||| |||||| || |||| |||| Sbjct 3894 CTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTC 3835 Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACG 205045 ||||||| ||| |||||| | ||| | | | |||| | ||||| | | Sbjct 3834 AGTCTGAGACTCG-AGAATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCT 3776 Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCC 205105 ||| |||| |||||| | ||| |||||| |||| ||| ||||| |||||| Sbjct 3775 TACCCTCCTT----CTCGTAGCTCTCGTAGAGCGCCTCAAACTCATCGCCGTAGACGTCC 3720 Query 205106 ATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCT 205164 || || || |||| ||||| ||||| |||| ||| | | || ||| || | Sbjct 3719 GCCAAACCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCG-ACACG 3661 Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| || || || |||||| || |||| |||| |||||||| | | | | || Sbjct 3660 CTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTC 3601 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATG---TCGGCGTGCCACGGCTC 205281 | ||| |||||||| |||||||||| | | ||| | || |||||||| ||||| Sbjct 3600 CTTTCCGTGGTTCTTTCTCAAGTCCAGGAA---CTCAAAGACATCCGCGTGCCATGGCTC 3544 Query 205282 TAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC----CATGCGAG 205337 | | | ||| | ||||| || | |||||| ||||||||||| || | ||| || Sbjct 3543 GACGTAGATGGCGAAAGCGCCAGGACGCTTGTTGCCACCCTGGTCAACGTATCTTGC-AG 3485 Query 205338 TCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392 | | |||||| || || ||||| || || | |||||| | | | ||||| || Sbjct 3484 TGTT---GTTGAAGACACGGAGCATAGGGACGATACCGTTCGAGTTTCCGTTGGT 3433 Score = 125 bits (138), Expect = 1e-23 Identities = 345/521 (66%), Gaps = 6/521 (1%) Strand=Plus/Minus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || ||||||||||||||||| ||||| || ||| || | ||||||||| | | Sbjct 4859 AGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAACCAGCAAAGTGCATGGATGTGATC 4800 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 |||| || | ||||| |||||| ||||| || |||||| || || ||| ||||| Sbjct 4799 TTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATG-AAGGC 4741 Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063 || || || || ||||| | || ||||| ||| || |||||||| || |||||| | Sbjct 4740 TCCACGGTCAGCAGCCATCTGGACGATGGTACGCTGGGAGATCTCCCAGACGGTCTTGTA 4681 Query 204064 CACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCA 204122 | | | || ||| ||| | | | | || || ||| ||||| ||| || | Sbjct 4680 GAGGGCCTTGATGTCGGCAGGGATGT-TGGGGATGTTCTGGATGGAGCCACCGTCCGCGA 4622 Query 204123 TCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGT 204182 | | | || || | | || ||||| |||| || || ||| | || Sbjct 4621 TGATACGGTTCTTCATGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTGAGCAACC 4562 Query 204183 GGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGA 204242 |||||||| | || || || || | ||| || | || | | | | ||| |||| Sbjct 4561 AGGGGTTGACTACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTTCGAGGTGT 4502 Query 204243 ATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAG 204302 |||| ||||| ||||||| ||||| |||||| | |||| || |||||||| |||| Sbjct 4501 ATGGCTCGAAACACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCATAGGAG 4442 Query 204303 CCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCG-CTTCAGAGAGGTCCAG 204361 | | ||| || |||||||| ||||||| | | | ||| | ||| |||||| |||| Sbjct 4441 CAACGAGGAGAGAGTTGCGGACACCGTGCTGCTTTA-TCTGAGCCTTGAGAGAGTCCCAG 4383 Query 204362 TCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTG 204402 || || | | || | ||||||||||||||| |||| Sbjct 4382 TCCCACAGATCGGTAGGGGTAACGCCCCACATGTCGTACTG 4342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795118573163600