Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq347 143 3e-29
seq1689 140 4e-28
seq475 125 8e-24
>seq347
Length=76637
Score = 143 bits (158), Expect = 3e-29
Identities = 147/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || || || | || ||||||||||||||||||||
Sbjct 19955 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAA 19896
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | || | | |||||||||| |||||| ||||| |
Sbjct 19895 GATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 19836
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| ||| ||||| || | ||||| || ||||||||||| || || ||
Sbjct 19835 GTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCAC 19776
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 19775 GAAGATTTGCAT 19764
>seq1689
Length=16827
Score = 140 bits (154), Expect = 4e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||||||||| |||||||| | || || ||||||||||| || ||
Sbjct 15221 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCAAA 15162
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | || | || |||||||||| ||||||| ||| | |
Sbjct 15161 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 15102
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| ||| || || || | |||||||| ||||| || || || |||||
Sbjct 15101 GTCGATGGTGTCGGACGACTCAACCTCGAGAGTGATGGTCTTGCCAGTAAGGGTCTTAAC 15042
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 15041 GAAGATTTGCAT 15030
Score = 129 bits (142), Expect = 7e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| | ||| |||||| ||||| ||||| || || |||||||| |||| |||
Sbjct 15694 ACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCGTCCTCG 15635
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| ||||| |||| |||||||||||| | || | || |||||| || |
Sbjct 15634 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGG 15575
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||||| | | | || || ||| || || |||| ||| || || ||
Sbjct 15574 ATCTTCGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTT 15515
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || |||||||||||
Sbjct 15514 CCGGTGAGAGTCTTGACGAAGATTTGCAT 15486
Score = 105 bits (116), Expect = 8e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| ||||| || |||||| || || |||||||| || || ||||| | || ||
Sbjct 15466 ACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 15407
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || ||||| |||| |||||||||||| | || | || |||||||||
Sbjct 15406 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGA 15347
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||||| ||| | | | || || ||| ||||| || | ||| || || ||
Sbjct 15346 ATCTTGGACTTGA-CGTTGTCAATGGTATCCGACGACTCCACCTCAAGCGTAATCGTCTT 15288
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || || || || || || |||||
Sbjct 15287 GCCAGTAAGAGTCTTGACGAAAATCTGCAT 15258
Score = 98.7 bits (108), Expect = 1e-15
Identities = 126/171 (74%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| || || ||||| ||||||||
Sbjct 14993 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAA 14934
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| || |||||||| | || | | ||||||||| |||||| |||| | |||
Sbjct 14933 GATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGCTCTT-AACGT 14875
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| | | || ||| || || || || | |||||||| ||||| ||||
Sbjct 14874 TGTCGATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCA 14824
Score = 91.5 bits (100), Expect = 2e-13
Identities = 162/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420
|||| ||| || | | ||| | ||||| || | || |||||||| ||||| ||||||
Sbjct 15946 TATTGGCCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAG 15887
Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480
||| || || | | || || |||||||| || || || |||| ||||||||||||
Sbjct 15886 TCGCTCAGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCC 15827
Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA 46539
| || | | |||||| ||| ||||| ||||| ||| | | | ||||| ||
Sbjct 15826 GGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCCGAAGA 15768
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || | |||||||| || || |||| || || || || || |||||
Sbjct 15767 CTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 15714
>seq475
Length=36479
Score = 125 bits (138), Expect = 8e-24
Identities = 137/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| |||||||| | || || ||||||||||| || || |
Sbjct 18391 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGA 18332
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| ||| |||||||| | || | | |||||||||| ||||||| ||||| |
Sbjct 18331 TCAGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 18272
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | |||||| ||| ||||| || | |||||||| |||||||||| || || || |
Sbjct 18271 CGATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 18212
Query 46584 AG 46585
||
Sbjct 18211 AG 18210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565212363706200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |