Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq512 253 2e-62 seq1689 127 2e-24 seq347 118 1e-21 seq475 93.3 4e-14 >seq512 Length=30657 Score = 253 bits (280), Expect = 2e-62 Identities = 580/863 (67%), Gaps = 25/863 (3%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| ||||| || ||| | || ||||| || || || || || ||| | Sbjct 18308 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCGC 18249 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 || ||| ||| | ||| || || || ||||||| | ||||||| ||| | | || Sbjct 18248 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTTCC 18189 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || || | ||||| || ||||| |||||||| ||||||||| ||| | | Sbjct 18188 GAG-AGAAAGC--AGCAGTCTATCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 18132 Query 132768 ATTAAGTCCCAGCAGACGCACCGGCA-GCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 || | || |||||| |||| || | | || || || | || |||||||||| || Sbjct 18131 GTTCATGCCGAGCAGA-GCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGGTGA 18073 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || ||||| | || || ||| | | ||| || || ||| | || || Sbjct 18072 CGGCTTCGGTAATGACGTCTTGGACGGCCTTCTTGCTTGGGCGGTGCTTGAGGTGGGAGA 18013 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 | | | ||| || ||||| || | |||||||| | ||| ||||| ||||| || Sbjct 18012 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGA 17953 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | |||| ||| | ||||||||| || || |||||||| || |||| ||||| ||| | Sbjct 17952 AGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGG 17893 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| ||||||||||| || || || || || |||| | | || || | || | Sbjct 17892 AGAAGAAGATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCT 17833 Query 133067 TG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 || || | |||||| | | ||||| || ||||| | || | ||| || || || ||| Sbjct 17832 TGTCTTG-GATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCG 17774 Query 133126 ATGGCGTTCAACA---AACGGAGTT---TCTCTTCCGAGGAACGCACGTAGGTGTCGATG 133179 ||||| || || | | | ||| || ||| | | ||| ||||||||| Sbjct 17773 ATGGCATTGAAGAGGTATGTGCGTTGAGCCTGCTCCTTG------ATGTATGTGTCGATG 17720 Query 133180 AGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCAC 133239 ||| || || | || | ||| | |||||| || |||||| || ||||| ||||| Sbjct 17719 AGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAG 17660 Query 133240 CGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATG 133299 || ||||| | || || || ||| ||||||| || || |||||||| || Sbjct 17659 CGGGCCTCTGGGATTTGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATT 17600 Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359 ||||| ||||||||| || || || ||||| |||||| | |||||| | |||||| Sbjct 17599 CCGTCAGAGGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTG 17540 Query 133360 AAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAAC 133416 | || | ||||||| | ||||||||| || || | |||||| ||||||| || Sbjct 17539 AGACGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAA 17480 Query 133417 GACGCCTCGGCTTTTTTGTACAT 133439 || |||||||| || |||||||| Sbjct 17479 GATGCCTCGGCCTTCTTGTACAT 17457 >seq1689 Length=16827 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| |||| || ||| || |||| | | | | |||| | | || Sbjct 14826 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACCATCGACAACGTTAAGAGC 14885 Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 || | ||| ||||| |||||||||||| | ||||| || || || || | ||| || || Sbjct 14886 AAGA-TCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAA 14944 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 || || || |||| ||||||||| ||||||||||||||| ||||| |||| || || Sbjct 14945 GCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 15004 Query 38447 TTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| || | || || Sbjct 15005 CTTGGTCCTCCGTCTGCGTGGTGG 15028 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| |||||||| |||| || ||| | || Sbjct 15030 ATGCAAATCTTCGTTAAGACCCTTACTGGCAAGACCATCACTCTCGAGGTTGAGTCGTCC 15089 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || ||| | ||||| Sbjct 15090 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 15149 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| ||||| || || | ||||| ||| |||||||||| Sbjct 15150 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 15209 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| | || || || ||||| || ||| Sbjct 15210 ATTCAGAAGGAGTCCACTCTTCACTTGGTCCTTCGT 15245 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || || || | || |||||| | | Sbjct 15486 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 15545 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || |||| || || ||||| |||||| | ||||| Sbjct 15546 GATACCATCGATAACG-TCAAGTCGAAGATCCAAGATAAGGAGGGCATTCCCCCGGACCA 15604 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||||||||| ||||| || |||| ||||| || || ||||| Sbjct 15605 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCTGATTACAA 15664 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | ||||| ||| | || || || Sbjct 15665 CATCCAGAAGGAGTCTACGCTACATCTTGTTCTCCG 15700 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || || || | || || ||| | | Sbjct 15258 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACGATTACGCTTGAGGTGGAGTCGTCG 15317 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || || | ||||| ||||| ||||| | ||||| Sbjct 15318 GATACCATTGACAACG-TCAAGTCCAAGATTCAAGACAAGGAGGGCATTCCTCCGGACCA 15376 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || |||||||| || | |||||||| |||||||| Sbjct 15377 GCAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAA 15436 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| |||| ||||||||||| || ||| Sbjct 15437 CATTCAGAAGGAGTCGACTCTGCATTTGGTTCTCCGT 15473 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || |||||||| |||| || ||| | | Sbjct 15714 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCTTCG 15773 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || || | || || ||||| || || | ||||| Sbjct 15774 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCA 15832 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || |||||||| || | | || || | ||||||||| Sbjct 15833 GCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCAGGACGCTGAGCGACTACAA 15892 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| || || || |||||||| ||| | | ||||||| Sbjct 15893 CATCCAGAAGGAGAGC-ACTCTTCACTTGGTGCTCCGTCTTCGTGGCGGCC 15942 >seq347 Length=76637 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || |||||||| || |||||| | || || ||| | || Sbjct 19764 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 19823 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| ||||| |||||||||||| | ||||| Sbjct 19824 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 19883 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | || ||||| ||||||||| Sbjct 19884 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGACTACAAC 19943 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 ||||| ||||| | || || || ||||| ||| Sbjct 19944 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTG 19976 >seq475 Length=36479 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || | |||||||| ||||||||| | || || ||| | |||||| | Sbjct 18211 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACTATC 18270 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| |||||||||||| | ||||| || || || Sbjct 18271 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAACGCCTG 18330 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| ||||| || || | ||||| || ||||||||||||||| ||| Sbjct 18331 ATCTTTGCTGGCAAGCAGCTTGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 18390 Query 38433 G 38433 | Sbjct 18391 G 18391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500149760790400