Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1435 360 2e-94 seq274 131 2e-25 seq477 129 7e-25 seq2688 100 4e-16 seq3654 82.4 1e-10 >seq1435 Length=8126 Score = 360 bits (398), Expect = 2e-94 Identities = 1025/1567 (65%), Gaps = 15/1567 (1%) Strand=Plus/Plus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || || || |||| ||| | | ||||| || || || || |||||| | || || Sbjct 5197 TCGATCTCCTCTTGCGAGAGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGTCTTT 5256 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | | |||| || || || |||| || || || ||||| | |||||| | Sbjct 5257 CCGGTGCCCTTCTCGAGCGCGGAGACGTTCATGATTCCGTTGGCATCGAGATCGAAGGTG 5316 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| | ||||||| ||| ||||| || | || || | || Sbjct 5317 ACCTCAATTTGGGGAACACCACGGGGTGCGGGTGGGATACCGGTGAGCTCGAACTTGCCC 5376 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 | | |||| ||| | | ||| || ||||| || |||| | || || || Sbjct 5377 ATCAGGTTGTTGTCCTTGGTGCGCTTGCGCTCACCCTCGAAGACCTGGATCAGGACACCA 5436 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || || || || || ||||||| | ||||| | ||| || || || || Sbjct 5437 GGCTGGTTGTCGGAGAAGGTGGAGAAGACCTCGGACTTCTTGGTTGGGATGGTGGTGTTG 5496 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 | || | || ||||| |||||||| ||| || | || ||||||||||| | Sbjct 5497 CGGTTGATGAGAGGAGTCATGATACCACCGGCAGTCTCAATACCGAGAGACAGAGGAGCG 5556 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGCG 7027 || ||||| || | | || | || | | | ||||| | | |||||| Sbjct 5557 ACATCCAAAAGGAGGATCTCGTTGGTGGACTTGGACGAGGTGTCACCACTGAGGATGGCA 5616 Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCT 7087 || || || | || ||||| || || |||||||| ||||| || | || || | || Sbjct 5617 GCCTGCACGGCAGCACCGTACGCAACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCC 5676 Query 7088 TTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCG 7147 || ||||| || || || | | | | || ||| | ||||| || || || || ||| Sbjct 5677 TTGCCGTTGAAGTAGTCGGTGATGAGTCTCTGGATTCTTGGGATACGGGTGGAACCTCCG 5736 Query 7148 ACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCG 7207 || | ||||| || | || || | || |||||||| | |||| || ||| Sbjct 5737 ACGAGGACGATCTCGTGGACCTTGGTCTTGTCGATCTTGGCGTCTGCGAGGACACGGTCG 5796 Query 7208 ACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTA 7267 || || | | ||||| | ||| ||||| |||||||| || |||||||| Sbjct 5797 ACGGGCTGGAGGGTGGAGCGGAAGAGATCCTGGCACAGCTCCTCAAAGCGGGCACGGGTG 5856 Query 7268 ATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCC 7327 ||||| || ||||| ||||| || ||| | | || ||||| || |||| || || || Sbjct 5857 ATGGAGGTGTAGAAGTCAACACCCTCGAAGAGAGAGTCAATCTCGATGGAGGTCTGGGCA 5916 Query 7328 GTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGC 7387 | || || | || ||||| || ||||| || || || || | ||||||||||||||| Sbjct 5917 GAGGACGAAAGAGTGCGCTTGGCACGCTCGCATGCAGTGCGGAGACGACGAAGGGCACGA 5976 Query 7388 GGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGG 7447 | ||| | | |||||||| || || || || ||||| | |||||| | | Sbjct 5977 GCGTTGGAGCTTAGGTCTTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTGACG 6036 Query 7448 AGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCA 7507 || | ||||||||| |||||||||||||| || || || || || | ||||| || Sbjct 6037 AGACGGTTATCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCG 6096 Query 7508 AAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAA 7567 |||||||| | || ||| | | | || ||||| || ||||||||||| || || || Sbjct 6097 AAGATACCCTCCTCGATGGTGAGGAGAGAGACATCGAAAGTACCACCACCAAGATCGAAG 6156 Query 7568 ATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCC 7627 || || ||||| || | || ||||| || |||||||| ||||| || || || Sbjct 6157 ATCAGGACGTTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAAGCGATGGCAGCGGCG 6216 Query 7628 GTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTC 7687 || || || || || ||||| || ||| || || || || | ||||| || || Sbjct 6217 GTAGGCTCGTTGATGATACGGAGGACGTTGAGTCCGGCGATGAGACCGGCATCCTTGGTA 6276 Query 7688 GCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTC 7747 || || || || || ||||| |||||||| ||||| || || || |||| |||| Sbjct 6277 GCCTGACGCTGGGAGTCGTTGAAGTAGGCGGGGACGGTGACAACGGCGTTGTTGACGGAT 6336 Query 7748 TTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCT 7807 |||||| || | || ||| | || ||| ||| || | ||| || || ||||| Sbjct 6337 CCACCGAGGTAGGCCTCAGCGGTCTCGCGCATCTTGACGAGGATCATGGAGGAGATCTCC 6396 Query 7808 TCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT--CAATCATGGGTTTATCCG 7865 || | | || | || || || || || || || || | || || || || || Sbjct 6397 TCGGGTGTGAAGTCCTTGGTCTCGCCCTTGAACTCGACCTGGCAGACA-GGCTT--GCCT 6453 Query 7866 CAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCG 7925 | | | ||| | ||| | | | | ||||| ||| | ||||||| ||| | Sbjct 6454 C--CCTTGTCGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGG 6511 Query 7926 AAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTG 7985 ||||| | ||||| |||||||| || || || || ||||| ||||||||||||| Sbjct 6512 CGAACTTGCGACCGATCAGACGCTTGGCGTCGAAGACGGTGTTGGTGGGGTTCATGGCGA 6571 Query 7986 TTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACG 8045 |||||||| || || || ||||| ||||| || | || || || || ||| ||| Sbjct 6572 CCTGGTTCTTGGCGGCATCACCGATCAGACGCTC---GGTGTCAGTGAAGGCAACGAACG 6628 Query 8046 ATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGA 8105 ||||||| || || || || |||||||| ||||| || || | |||||| | | ||| Sbjct 6629 ATGGGGTTGTGCGGTTGCCCTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGA 6688 Query 8106 CGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTATATA 8165 || |||||||| || || || || ||||| ||||||| |||| | | || || || | Sbjct 6689 TACCCACGCACGAGTAGGTGGTACCCAAATCGATACCGA-TGCTGGGGCCAGTTAGTACA 6747 Query 8166 TT-TTGT 8171 || |||| Sbjct 6748 TTGTTGT 6754 >seq274 Length=20523 Score = 131 bits (144), Expect = 2e-25 Identities = 227/327 (69%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | || || ||| || Sbjct 18434 TCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCGGTAGAAAGAACCTCGAAGGCGCCA 18375 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || ||||| || || || ||||| || || | | || | Sbjct 18374 CGGTCAATGGACAGGAGAGACACATCGAAGGTTCCTCCACCGAGATCGTAGACGATGA-- 18317 Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || || | | | ||||||| |||||||| |||| || || || ||||| || Sbjct 18316 -TC-TGGCGCTCACCATCGGTCTTATCAAGACCGTAGGCGAGGGCGGCGGCGGTTGGCTC 18259 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | ||| || ||| ||| || || ||||| | | || || || || ||||||| Sbjct 18258 GTTGACAATGCGGAGAACGTTGAGTCCGGCAATGATACCGGCGTCCTTGGTGGCTTGTCT 18199 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| Sbjct 18198 CTGGTTGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAG 18139 Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782 || || || |||| || ||||| || Sbjct 18138 GTAAGACTCAGCGACCTCCTTCATCTT 18112 Score = 82.4 bits (90), Expect = 1e-10 Identities = 139/201 (69%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 7953 CATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAA 8012 |||| || | ||||| || |||||| || | ||||||||| || ||||| |||| | Sbjct 17885 CATCGAAGATAGTGTTCTTTGGGTTCGCAGCGGCTTGGTTCTTTGCTGCGTCACCGACCA 17826 Query 8013 GACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGT 8072 | || || | | | || || || ||||| |||||||| ||| | |||||||||| Sbjct 17825 GGCGCTCCTCCT---CGGTGAAGGCAACGTAAGATGGGGTAATTCTGTGACCTTGGTCGT 17769 Query 8073 TCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTA 8132 | | | ||| || || | | | | ||| ||||| || || || || ||||| | Sbjct 17768 TGACGAGAATCTCGACCTGACCACCCTTCATGACACCGACACAAGAGTAGGTGGTTCCCA 17709 Query 8133 AATCAATACCGATTGCTTGAG 8153 ||||||||||||| || ||| Sbjct 17708 AATCAATACCGATAACTGGAG 17688 >seq477 Length=5863 Score = 129 bits (142), Expect = 7e-25 Identities = 223/324 (69%), Gaps = 9/324 (3%) Strand=Plus/Plus Query 7435 GAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGT 7494 |||||| |||||| | | |||||||| | |||||||||||| || || || ||||| Sbjct 3046 GAAGTGCTCAAGGAGGTTGGTGTCGAAATCCTGACCACCCAAGTGGGTGTCACCAGCGGT 3105 Query 7495 CGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACC 7554 || ||||| |||| ||| || | ||||| | | || ||||| || || ||||| Sbjct 3106 GGCCTTGACGGTGAAGACACCACCCTGGATGTTCAGGAGGGAGACATCGAAAGTTCCACC 3165 Query 7555 ACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT------ATCGAGACC 7608 ||| || || | ||||| ||||| || | | | | ||| | ||||||| Sbjct 3166 ACCGAGATCGTAGATGAGAACGTTGCGCTCCTTGGC---GGACTTTCCGGCACCGAGACC 3222 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| |||||||| || || || || || || || ||||| ||| ||| ||||||||||| Sbjct 3223 GTAAGCGATAGCGGCGGCGGTAGGCTCGTTGATGATACGGAGAACGTTGAGGCCAGCAAT 3282 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | | || || || || || || || || ||||| |||||||| ||||| || | Sbjct 3283 GGCACCGGCGTCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAGGCTGGGACAGTGAT 3342 Query 7729 GACCGCGTCCGTGACTTTCTTACC 7752 || || | | ||| ||||| || Sbjct 3343 AACGGCCTTGGAGACCTTCTTGCC 3366 >seq2688 Length=33141 Score = 100 bits (110), Expect = 4e-16 Identities = 200/291 (69%), Gaps = 14/291 (5%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||||||||| || || || ||| | || || || || | ||| Sbjct 31997 ATCGAAGTCCTCACCACCCAAGTGAGTGTCACCGTTGGTAGACTTAACCTCGAAAACACC 31938 Query 7516 TCCTTCAATGTTT-AACAACGAA-ACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 |||| | | || ||| | | ||| || || || ||||||| || | | Sbjct 31937 --CTTCTGGATCTCAAGGACGGAGATATCGAAGGTTCCTCCACCCAAATCGTAGACAGCA 31880 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| || | || || || ||| || |||||||| || | ||| || || || || Sbjct 31879 ACGATCCTGTCCTCCTC------CTTCTCAAGACCGTAGGCAAGAGCAGCGGCGGTAGGC 31826 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691 || |||| || ||| ||| ||||||||||||||| ||| | ||||| || || |||| Sbjct 31825 TCGTTAACAACACGGAGAACGTTCAGGCCAGCAAT--TTGACCAGCATCCTTGGTGGCTT 31768 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA 7742 | || || || ||||| ||||| || ||||| || || || |||| | ||| Sbjct 31767 GACGCTGGGAGTCGTTGAAGTAAGCGGGGACAGTGACAACGGCGTTCTTGA 31717 >seq3654 Length=7047 Score = 82.4 bits (90), Expect = 1e-10 Identities = 231/350 (66%), Gaps = 10/350 (3%) Strand=Plus/Minus Query 105727 ACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCA 105786 || |||||||| || ||| | || || | ||| || | ||||| | || |||| Sbjct 3497 ACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCGTTCGAGTTTCCG 3438 Query 105787 TTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCC 105846 || || || ||| | || | | ||||| | | ||||| || || || || || Sbjct 3437 TTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAATGTTCAATCCGATGCCT 3378 Query 105847 CCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTA 105906 ||||| ||| ||| |||||| || | ||| || || ||||| || |||||| Sbjct 3377 CCAGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCCTCAATACTA 3318 Query 105907 TCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACCAGCATT 105965 || ||||| | | | || ||| || ||||||| || || ||| |||||||||||||| Sbjct 3317 TCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTGGTGTACCAGCATT 3259 Query 105966 GAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAAC----GCTTCGTATGTTT 106021 ||| || ||||| | || || || ||| ||| || || | || |||||| | Sbjct 3258 GAAGAGTGTTGGGGAAGCGTGTGTG---AAATATTTGGAAGACATGAGGTT-GTATGTCT 3203 Query 106022 CCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATA 106071 | | | | |||||||| | || ||||| |||| || || |||||| Sbjct 3202 CGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATA 3153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635103544195400