Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3654 237 2e-57 seq512 141 1e-28 >seq3654 Length=7047 Score = 237 bits (262), Expect = 2e-57 Identities = 944/1460 (65%), Gaps = 33/1460 (2%) Strand=Plus/Plus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTC-TTGAT 111604 || ||||| |||||||||| ||| |||||| | | || ||||| ||| | Sbjct 3073 TACTTTGGCTTCAAGACCCTTGAGCGGTCCTACCTTCTCCGCCTTGATGGCAAGGTTGCT 3132 Query 111605 GGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGA 111664 | | | || ||| ||||| | ||||| || || | || || || || || |||||||| Sbjct 3133 G-AGAGGCCGCAGCACATGATTATGCGTGTTGCCGTTGGCATTCACGGCGAGGATATTGA 3191 Query 111665 TTCTGTTTTGGAGACATACGACAAGATGTCC-CGTGGTATGTTCATCCACGCAACACCAA 111723 | ||||||||| || ||||| | ||| |||| ||||| | |||| Sbjct 3192 GAAGACCATCGAGACATACAACCTCATGTCTTCCAAATAT-TTCACACACGCTTCCCCAA 3250 Query 111724 CCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACA 111783 | |||||||| |||||||||||| |||| |||| || ||| | | | | | Sbjct 3251 CACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGACATGA 3310 Query 111784 AGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGT 111843 |||||||| || | || || || | ||| |||| |||||| ||||||||| Sbjct 3311 AGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACGTGTGCCATGATCTCAAAGA 3370 Query 111844 GGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGA 111902 ||||| || ||||| || |||| || | || | |||| | || | ||| Sbjct 3371 CTGCTGGAGGCATCGGATTGAACATTCACCGTATCCGTGCCA-CTGGTGCATACATTGCC 3429 Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 ||||| || || | || | ||||| | || ||||| || || || ||| ||| || Sbjct 3430 GGTACCAACGGAAACTCGAACGGTATCGTCCCTATGCTCCGTGTCTTCAACAACACTGCA 3489 Query 111963 CGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 | || || |||| | ||| ||||| || || |||| |||| | ||| Sbjct 3490 AGATACGTTGACCAGGGTGGCAACAAGCGTCCT---GGCGCTTTCGCCATCTACGTCGAG 3546 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 ||||||||||||||| || | |||||||| || ||| | ||||| || | ||||| Sbjct 3547 CCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAGGAGGAA 3606 Query 112077 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | || ||| || | |||| |||||||||||| || ||||||||||||||| | || Sbjct 3607 GTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTC 3666 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGC 112195 ||| ||| ||| | ||| ||||| | || || || || || || ||| | | || | Sbjct 3667 GAGAAGAACGGCGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGTTTGGCGGACGT 3725 Query 112196 CGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC 112255 | || || |||||||| || |||||| | |||||| | || || || | | || Sbjct 3726 CTACGGCGATGAGTTTGAGGCGCTCTACGAGAGCTACGAGAAGGAGGGTAAGG-GTC-GC 3783 Query 112256 --GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 112312 ||| | | || | || | | ||| | | |||||| ||||||| || ||||| || Sbjct 3784 AAGACCAT-CAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGG 3842 Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 112372 | || | ||||| ||||| || ||||| |||| ||||| || || ||||| | || Sbjct 3843 AAACCCTTTCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 3902 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 112432 | ||| || |||||||| || ||||| || | || | | | | ||||||| Sbjct 3903 TACCATCCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAGGT 3962 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-- 112490 || ||||| ||| | ||||| | || || || | ||||| || || | ||| | Sbjct 3963 TGCCGTGTGCAACTTGGCATCCCTTGCCCTGCCAACATATGTTGA--CATGGCCAACGGC 4020 Query 112491 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGA 112550 || | ||| | | || || ||||| || || | ||| || ||| | |||| Sbjct 4021 ACTTATGACTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTTAAGAACTTGAACAAG 4080 Query 112551 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 112610 | ||||| || | |||||||| ||| || | || | | ||| | Sbjct 4081 ATCATTGACGTCAACTACTACCCCGTCGAGGAGGCCAGACGCAGCAACTTCCGTCACAGG 4140 Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 112670 ||| ||| | | |||||||| ||||| || |||| |||| | | |||| | || Sbjct 4141 CCAGTTGCTGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCTTTC 4200 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 |||||| ||| || ||| |||| | | || |||||||| || || |||| ||| Sbjct 4201 GATTCCCCCGAGGCCAAGTTCCTCAACTCTCAGATCTTTGAGACCATTTACCACGGTGCT 4260 Query 112731 CTTGAGGCGAGTTC--GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 112788 |||| || | | |||| |||| || || | || |||| || |||| ||||| | Sbjct 4261 -TTGA-CCGCCTCCGTGGAGCTGGCCCAGATTCACGGCACATACGAGACCTACGAGGGAT 4318 Query 112789 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCAC 112847 |||| | || | || | ||| || | || ||||||| || | || | | || Sbjct 4319 CTCCCGTGTCGAAGGGAGAGCTCCAGTACGACATGTGGG-GCGTTACCCCTACCGATCTG 4377 Query 112848 TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 112907 | ||||||||| ||||||||| | || ||| || | ||| | || ||| ||| | Sbjct 4378 TGGGACTGGGACTCTCTCAAGGCTCAGATAAAGCAGCACGGTGTCCGCAACTCTCTCCTC 4437 Query 112908 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 112967 | || || ||||| || || |||||| | || || | || || || || || || Sbjct 4438 GTTGCTCCTATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAGTGTTTCGAG 4497 Query 112968 CCCTACACGACGAACATCTA 112987 || ||||| ||||||| || Sbjct 4498 CCATACACCTCGAACATTTA 4517 >seq512 Length=30657 Score = 141 bits (156), Expect = 1e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| | |||||| | || |||| || ||| | ||||| || || |||||| | | | Sbjct 17760 CTCTTCAATGCCATCGAGACTATTCCTTGCATTAAGAAGAAGGCTGACTGGGCTGTCAGG 17819 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| | | |||| | | | ||||||| |||| ||| | || ||||| || || Sbjct 17820 TGGATCCAAGACAAGGATTC-TACCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGA 17878 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 ||||||||||||||| || |||||| | |||| |||||||||||||| || ||||| Sbjct 17879 GGGTATCTTCTTCTCCGGCTCCTTCGCATCCATTTTCTGGCTCAAGAAGCGTGGCCTCAT 17938 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 | | || || |||||| |||||||| ||||| ||||||||||| |||||| Sbjct 17939 GGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGGTCTCCAC 17990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620713807053200