Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3654 260 2e-64 seq1813 118 1e-21 seq247 116 4e-21 seq512 93.3 5e-14 seq643 89.7 6e-13 >seq3654 Length=7047 Score = 260 bits (288), Expect = 2e-64 Identities = 1175/1842 (64%), Gaps = 59/1842 (3%) Strand=Plus/Minus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || || || ||||| || || ||||| ||| |||||| | | ||||| || | | Sbjct 4862 CGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAACCAGCAAAGTGCATGGATGTG 4803 Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527 | ||| | ||| || || ||| | ||| | ||||| |||||||| ||||| Sbjct 4802 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAG 4743 Query 109528 CGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTCCCAGACAGTC 109584 ||||| ||||| ||||| | ||||| ||| || || || |||||||| ||| Sbjct 4742 GCTCCACGGTCAGCAGCCATCTGGACGATGGTACGCT---GGGAGATCTCCCAGACGGTC 4686 Query 109585 TTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCC 109644 ||||| | |||||| || | || |||| |||||| || || |||||||| || Sbjct 4685 TTGTAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTCTGGATGGAGCCACCGTCC 4626 Query 109645 TTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACC------GACC---TTTTTGAGA 109695 | || | | |||||| | | ||||| ||||| |||| | ||||| Sbjct 4625 GCGATGATACGGTTCTTCATGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTGAG- 4567 Query 109696 TCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAG 109755 |||| || | ||||| || || || ||||| || || || ||| Sbjct 4566 ----CAACCAGGGG----TTGACTACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAA 4515 Query 109756 ATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCT 109815 ||||| | ||||| || ||||||||||| ||| ||| || || || | |||||||| Sbjct 4514 ATGTTCGAGGTGTATGGCTCGAAACACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCA 4455 Query 109816 GTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGC 109875 |||||||| ||||| | ||| ||| ||| |||| ||| | | ||||| | | | Sbjct 4454 GTGGGCATAGGAGCAACGAGGAGAGAGTTGCGGACACCGTGCTGCTTTATCTGAGCCTTG 4395 Query 109876 ATTGCGTCCCAATCATAACGACCACTAAATT--TAGTCTCACCATCCCACATATCTGGTT 109933 | | |||||| || |||| | || ||| | | ||||||| || | Sbjct 4394 AGAGAGTCCCAGTC-------CCAC-AGATCGGTAGGGGTAACGCCCCACATGTCGTACT 4343 Query 109934 GAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGG 109993 | || | |||| | | ||||| |||| | | ||||||| | || | || || || Sbjct 4342 GGAGCTCTCCCTTCGACACGGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGG 4283 Query 109994 CCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCA 110053 ||| ||| || || | || | || || || |||||||| || |||| || | Sbjct 4282 CCAGCTCCACGGAGGCGGTCAAAGCACCGTGGTAAATGGTCTCAAAGATCTGAGAGTTGA 4223 Query 110054 TGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGAC 110113 || | ||| | ||||| ||||| | | | || |||| || |||| Sbjct 4222 GGAACTTGGCCTCGGGGGAATCGAAAGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGAC 4163 Query 110114 CCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGG 110173 |||| ||||| | | ||| || | || | ||| ||||| || || |||| Sbjct 4162 CCTGGACACCAACAGCAACTGGCCTGTGACGGAAGTTGCTGCGTCTGGCCTCCTCGACGG 4103 Query 110174 GGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCAT 110233 |||| ||||| ||| |||| | || | ||||| ||| || |||| || | Sbjct 4102 GGTAGTAGTTGACGTCAATGATCTTGTTCAAGTTCTTAACAACAACCTGTGTGACCTCGT 4043 Query 110234 GGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAG 110293 | || || | | | || | || | || | | |||||| | || || |||| | Sbjct 4042 GAAGCTTCTGGAAGTCATAAGTGCCGTTGGCCATGTCAACATATGTTGGCAGGGCAAGGG 3983 Query 110294 ACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACA 110353 | || | |||||||| | | ||| ||| | | | ||| || | ||| || || || | Sbjct 3982 ATGCCAAGTTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCAAA 3923 Query 110354 AGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCT 110413 |||||| || ||| ||| | ||||||||| || ||| |||||| ||||||| Sbjct 3922 GGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCT 3863 Query 110414 TATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CA 110472 | || |||||| | ||| | || || || ||||| |||| |||||||| | ||| | | Sbjct 3862 TGTACAGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCT 3803 Query 110473 TCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGT 110530 || | ||| || || |||| | | ||| |||| |||||| | ||| | Sbjct 3802 TCTG-GGCCTTGATGGTCTTGCG--ACCCTTACCCTCCTTCTCGTAGCTCTCGTAGAGCG 3746 Query 110531 CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-GTCGGGACAGAAGAGG 110589 ||||||| || | ||||| || || | | ||| || || || ||| || | ||| Sbjct 3745 CCTCAAACTCATCGCCGTAGACGTCCGCCAAACCAGG-GCATTCGTTGGGGCACATGAGA 3687 Query 110590 GACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAG 110649 | ||| | || || ||| || | ||||||||| || ||||| ||||| | || || Sbjct 3686 GTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAG 3627 Query 110650 AAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCC 110709 || | ||||||| ||| | || || | || ||||| | | |||| || || Sbjct 3626 AACAAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCA 3567 Query 110710 ATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGA------ 110763 | || ||||| ||||||||| |||| |||| |||| | || | |||| Sbjct 3566 AAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCC---AGGACGCTTGTTG 3510 Query 110764 CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCA 110823 || |||||| ||| || | ||| ||| |||||||| | ||||||||| | || || Sbjct 3509 CCACCCTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCG 3450 Query 110824 TCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGGATATG 110882 | || | || || ||||| ||| | || || | ||||||| || ||| || | Sbjct 3449 TTCGAGTTTCCGTTGGTACCGGCAATGTATGCACC-AGTGGCACGGATACGGTGAATGTT 3391 Query 110883 CATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAA 110941 || || || || || || ||| || |||||| ||| ||||||| |||| | Sbjct 3390 CAATCCGATGCCTCCAGCAGTCTTTGAGATCATGGCACACGTCT-TGAGTGTGTCATAGA 3332 Query 110942 TACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAG 111001 |||| ||||| ||| |||| || | | | ||||| || |||| ||| | | | Sbjct 3331 TACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTG 3272 Query 111002 GCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGG--GACATCTT 111059 | || || |||||||||||||| || | || || |||| | | |||| ||||| Sbjct 3271 GTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-ATA-TTTGGAAGACATGAG 3214 Query 111060 GTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCAT 111119 ||||||||| |||| | | ||| | |||||||| |||| |||||| ||||| Sbjct 3213 GTTGTATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCAT 3154 Query 111120 GAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTC 111179 | ||| | || ||| | || | ||| ||||||| || ||||||| | ||| Sbjct 3153 AATCATGTGCTGCGGCCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGGTAGGACCGCTC 3094 Query 111180 TAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 |||||||||| ||||||||| | | ||||||||| || Sbjct 3093 AAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTC 3052 >seq1813 Length=3895 Score = 118 bits (130), Expect = 1e-21 Identities = 188/266 (71%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 |||||| || || || ||||| || || ||||| ||| | ||||| |||| | | | Sbjct 2084 GAAAAGCTCGCGGACGCGCTTGGCGCCGACACCGACGTAGATCTCGTCGAATTCACTGCC 2025 Query 11796 AGAACACTGAAT--GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853 ||| || |||| ||| || || || ||| ||||||| || || |||||||||||| Sbjct 2024 AGA-CA-TGAAGAAGAACGGGACGCCAGCCTCGCCAGCGACAGCGCGTGCGAGGAGAGTC 1967 Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCA 11913 || || ||||| || | |||| |||| ||| | || ||| | |||| |||| Sbjct 1966 TTTCCGGTACCGGGAGGACCAACGAGGAGGACACCCTTGGGAAGCTTGCCACCGAGAGTC 1907 Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAG 11973 || | || || ||||||||||||||||||| ||||| |||||||||||||| | Sbjct 1906 GAGAACTTTTCGGGGTTCTTGAGGAAGTCCACAAGCTCCTGCAGTTCCTCCTTGGCCTCG 1847 Query 11974 TCGATACCCTCAACATCGGTGAAACG 11999 ||| || | |||||| | ||| || Sbjct 1846 TCGCAGCCGTGAACATCAGAGAAGCG 1821 >seq247 Length=6841 Score = 116 bits (128), Expect = 4e-21 Identities = 334/505 (66%), Gaps = 23/505 (5%) Strand=Plus/Plus Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564 |||||| ||||| || || | ||||| | ||| | || ||| | ||| ||| | || Sbjct 3717 ATCGAAGCGACCAGGACGCATGAGAGCCTTATCCAAAACATCCGGTCTGTTCGTACCCGC 3776 Query 11565 AATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGAT 11624 | || |||| | || ||| ||| |||||||| || ||||| | |||||| | Sbjct 3777 CAGAACGACAACCTGATCCTTGGTGTTGAAGCCGTCCATCTCCGTGAGGATCTGGTTCAG 3836 Query 11625 CGTCTGTTCACGCTCATCGTTG--------GAGGGCATACCAC-CTGCCGAACGCTTCTT 11675 ||| || ||||| ||||| || | || || | || ||| ||| Sbjct 3837 CGTGCTCTCGCGCTCCTCGTTACCGCCTCCGAAGCCAGACTTCTCTCTCGA------CTT 3890 Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGT-TGGT-TGGCACGTGCCTGT 11733 |||| ||||| ||||| || ||||| | ||||||||| |||| | || || | || Sbjct 3891 TCCGATCGCGTCGATCTCGTCAATGAAGATGATACACGGGGTGGTCTTGCGCGC-CATGG 3949 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 |||| || ||||| |||||| | || ||||| ||||||||||| | ||| | | Sbjct 3950 -CGAACAGGTCACGCACACGCGATGGACCGACACCGACGAACATCTCCATGAACTCGGAA 4008 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || | |||||||| |||||| || ||||| ||||| |||| || || || | Sbjct 4009 CCGCTG-ACACTGAA-GAAGGGCACGCCGGACTCGCCAGCAGTGGCCTTCGCCAGCAGGG 4066 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTC 11911 ||||||| || || || | || | || | || || ||||| |||||||| || | Sbjct 4067 TCTTACCGGTTCCGGGAGGTCCGGACAGGATAGCACCGCGGGGAATCTTGGCGCCTAGCC 4126 Query 11912 CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGG 11971 |||| ||||| ||| |||| |||||| || | |||| | |||| ||| || Sbjct 4127 TCGAGTAACGCTCCGGCGTCTTCAGGAAGCTGACGAACTCCATGATTTCCAGCTTTGCCT 4186 Query 11972 AGTCGATACCCTCAACATCGGTGAA 11996 ||| || || | ||||||| ||| Sbjct 4187 CGTCCATGCCAGCGACATCGGCGAA 4211 >seq512 Length=30657 Score = 93.3 bits (102), Expect = 5e-14 Identities = 200/296 (68%), Gaps = 5/296 (2%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || || ||||||||||| || |||| || |||| |||||| || Sbjct 17989 TGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCCA 17930 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| || |||| || || || |||||||| ||||| || | Sbjct 17929 CGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGCG 17870 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCG-AGACTTGTC---GAACCACTTGAGAGC 119683 || || || | ||||||| || |||||| | | |||||| || |||| ||| ||| Sbjct 17869 GCAAAGGCAACGAGACGCTGGGC-AAAGGTAGAATCCTTGTCTTGGATCCACCTGACAGC 17811 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTT 119743 ||||| ||||| || ||||| || | ||| | |||||| | ||| || | | Sbjct 17810 CCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTGAAGAGGTATGTGCG 17751 Query 119744 TTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAA 119799 || ||| ||||| || ||| | || ||||| ||||| ||||| | |||| Sbjct 17750 TTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAA 17695 >seq643 Length=2579 Score = 89.7 bits (98), Expect = 6e-13 Identities = 74/90 (82%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 1542 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 1601 Query 136777 GGGAACAGCTTTTAGA---TATATTTTTTG 136803 | || || | | | | ||||||||||| Sbjct 1602 GTGACCAAATATCACAGATTATATTTTTTG 1631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588948870293000