Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 255 7e-63
seq512 116 4e-21
>seq3654
Length=7047
Score = 255 bits (282), Expect = 7e-63
Identities = 737/1118 (66%), Gaps = 27/1118 (2%)
Strand=Plus/Minus
Query 106274 AATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTT 106333
||| |||| || ||||| || ||||| | | ||| || ||||| || | || |
Sbjct 4178 AATGCATCAGCAAGACCCTGGACACCAACAGCAACTGGCCTGTGACGGAAGTTGCTGCGT 4119
Query 106334 CGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACA 106393
| || ||| ||||| || | || |||||||| ||| | || || ||||
Sbjct 4118 CTGGCCTCCTCGACGGGGTAGTAGTTGACGTCAATGATCTTGTTCAAGTTCTTAACAACA 4059
Query 106394 ATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATAC 106453
| || ||||| || ||||| || | | ||| |||||| | | | |||||
Sbjct 4058 ACCTGTGTGACCTCGTGAAGCTTCTGGAAGTCATAAGTGCCGTTGGCCATGTCAACATAT 3999
Query 106454 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 106513
|||| ||||| | |||||||| ||||| || || |||||| | | ||||||
Sbjct 3998 GTTGGCAGGGCAAGGGATGCCAAGTTGCACACGGCAACCTCATCTGGGGCAGAGTACTCG 3939
Query 106514 AAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTT 106573
| ||| ||||| || | |||||| || || || || | ||||| ||||| |||||
Sbjct 3938 ACAATCTCTGTGCAAAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 3879
Query 106574 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGA 106633
|||||| ||||||||||| |||||| | || | || ||||| ||||| |||| ||||
Sbjct 3878 CGGTTGCAGGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGA 3819
Query 106634 ATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTC 106689
|| | | ||| | | || | | || | |||| ||| | || | |||||| |||
Sbjct 3818 ATGGAGTACCAAAGCTTCTGGGCCTTG----ATGGTCTTGCGACCCTTACCCTCCTTCTC 3763
Query 106690 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749
||| | |||||| || |||||||| || || |||| | | ||| || || ||
Sbjct 3762 GTAGCTCTCGTAGAGCGCCTCAAACTCATCGCCGTAGACGTCCGCCAAACCAGG-GCATT 3704
Query 106750 -GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTG 106808
|| || || | |||| ||| | || || ||| || ||||||||||| || || |
Sbjct 3703 CGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAG 3644
Query 106809 GAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGT 106867
| ||||| || | | || | || | ||| || | || || | || ||||| |
Sbjct 3643 GGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGA-CTTCCTCCTTTCCGTGGTTCTTT 3585
Query 106868 CGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGAT 106927
| || || |||||||| | || |||||||||||||||||| | |||| |||| ||
Sbjct 3584 CTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCG 3525
Query 106928 CCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGA 106981
|| ||||| ||| | || | || || | || ||| ||| || || ||
Sbjct 3524 CC---AGGACGCTTGTTGCCACCCTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGG 3468
Query 106982 AGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCT 107041
||||| || | ||||| | || | || || || || ||| | | ||||
Sbjct 3467 AGCATAGGGACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCA 3408
Query 107042 CTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 107101
| | | || |||| || || || || ||||| ||||||||| |||||| |
Sbjct 3407 CGGATACGGTGAATGTTCAATCCGATGCCTCCAGCAGTCTTTGAGATCATGGCACACGTC 3348
Query 107102 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 107161
| || || |||||||||| | || |||||||| || ||| | ||||||
Sbjct 3347 TTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGAT 3288
Query 107162 GACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 107220
|||| ||| || || ||||||||||||||||||||| ||||| | ||||| |||| ||
Sbjct 3287 GACAGCTG-GGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-AT 3230
Query 107221 ACCTTGG--GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 107278
| |||| ||||| || ||||||||| | | ||||| || || ||||| |||
Sbjct 3229 A-TTTGGAAGACATGAGGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATG 3171
Query 107279 CCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGT 107338
|| | ||| |||||||||| ||||| || || | || | ||||||| || ||
Sbjct 3170 CCAACGGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTGCCATCAAGGCGG 3111
Query 107339 TGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
|||| ||| | ||||||||| |||| ||||||||
Sbjct 3110 AGAAGGTAGGACCGCTCAAGGGTCTTGAAGCCAAAGTA 3073
>seq512
Length=30657
Score = 116 bits (128), Expect = 4e-21
Identities = 161/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
|||||||||||| || ||||| || || || || |||||| ||||| | |||||| ||
Sbjct 17990 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 17931
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||| | ||| |||| | ||| || |||||||||||||||||||| ||
Sbjct 17930 ACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGC 17871
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463
||||| |||| || |||| ||| |||| || | |||| | | ||| | | |
Sbjct 17870 GGCAAAGGCAACGAGACGCTGGGCAAAGG-TAGAATCCTTGTCTTGGATCCACCTGACAG 17812
Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506
|||| | |||||||||| ||| || || | ||| | ||||||
Sbjct 17811 CCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGC 17769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589953624009400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |