Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 163 6e-35
seq347 152 1e-31
>seq1689
Length=16827
Score = 163 bits (180), Expect = 6e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| ||||| ||||| || ||||| ||||| || | || || | ||||| || ||||||
Sbjct 15460 TGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAGCTGC 15401
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| |||||||| || || || ||||| ||||||||||| || ||||||||||| ||
Sbjct 15400 TTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGAATCTTG 15341
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||||||| |||||||| ||||| ||||| ||||| |||| |||||| || ||
Sbjct 15340 GACTTGACGTTGTCAATGGTATCCGACGACTCCACCTCAAGCGTAATCGTCTTGCCAGTA 15281
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| ||| || ||||| | |||||
Sbjct 15280 AGAGTCTTGACGAAAATCTGCAT 15258
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
|||||| || || || ||||| || || || |||||||| | ||||| | || || ||
Sbjct 15695 AACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCGTCCTC 15636
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || ||||| || || || || ||||| || |||||||| || || |||||
Sbjct 15635 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTG 15576
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||||||||| || ||||| ||||| || ||||| || |||| |||||
Sbjct 15575 GATCTTCGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTT 15516
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || | ||| || ||||| | ||||||
Sbjct 15515 TCCGGTGAGAGTCTTGACGAAGATTTGCAT 15486
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||||||| ||| || || || ||||| ||| || || || ||||| || |||||
Sbjct 15917 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTCCAGCTG 15858
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| || ||||| || || || ||||| || || || || || || || ||||| ||
Sbjct 15857 CTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTT 15798
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || |||||||||||| || || || || || | |||||||| ||
Sbjct 15797 GGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGAGTGATGGTCTTTCCAGT 15738
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || || ||||| | |||||
Sbjct 15737 CAAGGTCTTGACGAAAATCTGCAT 15714
Score = 125 bits (138), Expect = 2e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||||||||||||||| || ||||| ||||| |||| ||||| | ||||| || |||||
Sbjct 15233 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTG 15174
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| || || || ||||| || || ||||| || ||||| || || ||
Sbjct 15173 CTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 15114
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || || || |||||||| || || || || || || | ||||| || ||
Sbjct 15113 CGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGAGTGATGGTCTTGCCAGT 15054
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | ||||||
Sbjct 15053 AAGGGTCTTAACGAAGATTTGCAT 15030
>seq347
Length=76637
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
|||||||| || | ||||||||||||||| || || || ||||| || | ||| || |
Sbjct 19982 GAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACG 19923
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
||||| ||||||||||| || |||||||| || || || ||||| || ||||| || ||
Sbjct 19922 GCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTC 19863
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||| || || || |||||| || || || ||||| || ||||| ||||||||
Sbjct 19862 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 19803
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || |||| || || ||||| | ||||||
Sbjct 19802 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 19764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109429216866395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |