Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 116 3e-21
seq347 93.3 3e-14
>seq1689
Length=16827
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||||||| || || ||| || ||||| ||||| || || || | || | || |||
Sbjct 15466 ACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 15407
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| ||||||||| || || ||||| ||||| || |||| |||| |||||||||||| |
Sbjct 15406 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGA 15347
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || | | | || |||| ||||||||| | ||||||||| ||
Sbjct 15346 ATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCCACCTCAAGCGTAATCGTCTTG 15287
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || | ||| || || |||||||||||
Sbjct 15286 CCAGTAAGAGTCTTGACGAAAATCTGCAT 15258
Score = 107 bits (118), Expect = 1e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||||||||| ||| || || || ||||||||||| ||| | || |||| || | |||
Sbjct 15689 ATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCGTCCTCGAGCTG 15630
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
||| || || || ||||| ||||| || |||| ||||| ||||||||| || |||||
Sbjct 15629 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGGATCTT 15570
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
|| || | | | | || |||| ||| || |||| |||||| || ||||| ||
Sbjct 15569 CGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGT 15510
Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766
| ||| || || || || |||||
Sbjct 15509 GAGAGTCTTGACGAAGATTTGCAT 15486
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
|||||| | || || | |||||| || || |||||||| || || || ||||| ||
Sbjct 15941 GCCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 15882
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
|| | | | || |||| ||||||||| ||||| ||||| ||||| || |||| ||
Sbjct 15881 CAGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGG 15822
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
| |||||||| || |||||| || || | | | || || | ||| ||
Sbjct 15821 GATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAAC 15762
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| | || || || ||||| ||||| || || || |||||||||||
Sbjct 15761 CTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 15714
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || ||| ||| || ||||| ||||| || || ||| | ||| | || ||
Sbjct 15238 ACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCA 15179
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| || ||||| ||||| ||||| || |||| ||| | ||||||||||||
Sbjct 15178 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 15119
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | | || |||| ||| ||||| | || || || ||
Sbjct 15118 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGAGTGATGGTCTTG 15059
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || | || || || || || |||||
Sbjct 15058 CCAGTAAGGGTCTTAACGAAGATTTGCAT 15030
>seq347
Length=76637
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || ||| ||| || || || ||||| || || || | || | || ||
Sbjct 19972 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATCCTCG 19913
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| ||||| || ||||| ||||| || |||| ||||| |||||||||||
Sbjct 19912 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 19853
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | || || |||| ||||||||| | || || || ||
Sbjct 19852 ATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTG 19793
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||||| || || || || || |||||
Sbjct 19792 CCCGTCAGGGTCTTCACGAAGATTTGCAT 19764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380920491735255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |