Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3654 219 8e-52 seq512 199 7e-46 >seq3654 Length=7047 Score = 219 bits (242), Expect = 8e-52 Identities = 863/1339 (64%), Gaps = 55/1339 (4%) Strand=Plus/Minus Query 221351 TTAGACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAA 221410 || ||||| ||| || ||||| | |||||| | |||| | | |||| | | || Sbjct 4331 TTCGACACGGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTC-CAC 4273 Query 221411 GACTGCG-TCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGC 221469 | ||| ||| ||| ||||||| ||||||||||||||| |||||| |||||| Sbjct 4272 GGAGGCGGTCAAAGCACCGTGGTAAATGGTCTCAAAGATCTGAGAGTTGAGGAACTTGGC 4213 Query 221470 CTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCC 221529 |||||| ||| ||| || | || || | | || | || || || ||||| || || Sbjct 4212 CTCGGGGGAATCGAAAGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACC 4153 Query 221530 GATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGC-------ACGGGAT 221582 | | | | |||||||| | ||||| || || |||||| ||||| | Sbjct 4152 AACAGCAACTGGCCTGTGAC-------GGAAGTTGCTGCGTCTGGCCTCCTCGACGGGGT 4100 Query 221583 AAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCA 221642 | |||||||||| || | ||||| | |||| | | || | |||||| | Sbjct 4099 AGTAGTTGACGTCAATGATCTTGTTCAAGTTCTTAACAACAACCTGTGTGACCTCGTGAA 4040 Query 221643 GCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTA 221702 |||||||| | || || | ||||| | | | || ||| | | | Sbjct 4039 GCTTCTGGAAGT----CAT-AAGT----GCCGTTGGCCATG---TCAACATATGTTGGCA 3992 Query 221703 GGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCT 221762 |||||| | |||| ||| |||||||| ||||| || | | |||| | |||| Sbjct 3991 GGGCAAGGGATGCCAAGTTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCT 3932 Query 221763 CTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGG 221822 |||| || |||||| || |||||| || |||| || || || |||||| ||| Sbjct 3931 CTGTGCAAAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGC 3872 Query 221823 CAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGT 221882 || |||||||| ||||| || || || ||||| ||||| | | ||||| || Sbjct 3871 AGGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGT 3812 Query 221883 CCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCG 221941 ||| || | ||||| || | || ||| |||||| ||| || || | Sbjct 3811 ACCAAAGCT-TCTGGGCCTTGATGGTCTTGCGACCCTTACCCTC---CTTCTCGTAGCTC 3756 Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001 |||||| ||||||| || ||||| | || ||| || || || | ||| Sbjct 3755 TCGTAGAGCGCCTCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGGG 3696 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 ||||| ||| |||||| ||| | | ||| | || ||||||||| || |||||||| Sbjct 3695 CACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAG 3636 Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121 || || | || | || | || || |||||| |||| ||| || |||| ||| Sbjct 3635 AGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCC 3576 Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181 | |||||||| | || |||||||| ||||| | |||| ||| | |||||| || ||| Sbjct 3575 AGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGC 3516 Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTAC 222240 |||||||||||||| || || || | ||| | |||||||| || || | || || Sbjct 3515 TTGTTGCCACCCTGGTCAACGTATCT-TGCAGTGTTGTTGAAGACACGGAGCATAGGGAC 3457 Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTT 222297 | ||||| || |||||||| || |||||| ||||| ||| | | ||| Sbjct 3456 GATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTG 3397 Query 222298 ACTGGCAGACATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356 | || || ||||| || || || || ||| ||||||||||| || ||||||| | Sbjct 3396 AATG---TTCAATCCGATGCCTCCAGCAGTCTTT-GAGATCATGGCACACGTCTTGAGTG 3341 Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416 |||| ||| ||||| ||| |||||||| | || | || || || || |||| || Sbjct 3340 TGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCT 3281 Query 222417 GAG-ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475 | | | ||||| | || || || || || || || |||||||| || || | Sbjct 3280 GGGCCTGTGGTGTACCA-GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAA 3222 Query 222476 GACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCG 222535 ||||| || | ||| ||||| | | | | || | || |||||||| | ||| Sbjct 3221 GACATGAGGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCA 3162 Query 222536 CATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTG-----GAGCTGGAGAGCA 222590 | ||| ||||| ||| ||||||| ||| | ||||| || ||||| | Sbjct 3161 ACACGCATAATCATGTGCTGCGGCCTCT---CAGCAACCTTGCCATCAAGGCGGAGA--A 3107 Query 222591 GGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAA 222650 |||| || || || |||||||| |||||||| | | || || || | | ||| || Sbjct 3106 GGTAGGACCGCTCAAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTAAA 3047 Query 222651 CCACGGCGGCGTCCAGCTC 222669 ||||| | || ||||| Sbjct 3046 GGACGGCAGAGTTGAGCTC 3028 >seq512 Length=30657 Score = 199 bits (220), Expect = 7e-46 Identities = 556/854 (65%), Gaps = 16/854 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || ||||||||| || ||||||||||| Sbjct 17448 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAGGAGATTGATCTC 17507 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||||||| | ||| |||| || | ||| ||||| ||| | ||| | Sbjct 17508 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGACGATGAGCGCTACTTCATCTCC 17567 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || |||||||| || || || |||||||| || |||| | Sbjct 17568 CACGTTCTCGCTTTCTTCGCCGCCTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 17627 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| ||| || || || | |||||| || |||||||||||||| || ||| Sbjct 17628 TTCAGCAGTGAGGTCCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 17687 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||| | ||| || || || || || || ||||| | || Sbjct 17688 GAGAACATTCACGCCGAGACATACTCC---CTCCTCATCGACACATACATCAAGGAGCAG 17744 Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 || | | | || || || |||||||||| || || |||| |||| |||||| Sbjct 17745 GCTCAACGCACATAC-CTCTTCAATGCCATCGAGACTATTCCTTGCATTAAGAAGAAGGC 17803 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| | | ||||||| | | || |||| |||| | |||| || || || Sbjct 17804 TGACTGGGCTGTCAGGTGGATCCAAGACAAGGATTCTACCTTTGCCCAGCGTCTCGTTGC 17863 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 |||||| || || ||||| ||||| ||| ||| || || || |||| ||||||||||| Sbjct 17864 CTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCATCCATTTTCTGGCTCAA 17923 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || |||| | || ||| ||| || |||||||||||| | | |||||||| Sbjct 17924 GAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGG 17983 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069 |||||||| || || |||||||| |||| | | |||| | ||| || || Sbjct 17984 TCTCCACACTGACTTCGCCTGCCTCCTCTTCTC---CCACCTCAAGCAC-CGCCCAAGCA 18039 Query 26070 AG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNN 26128 || || ||||| | |||| | || || || |||||| ||||||| Sbjct 18040 AGAAGGCCGTCCAAGACGTCATTACCGAAGCCGTCACCATCGAGCAGGAGTTCTTGACTG 18099 Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188 | ||||||||| || | |||| ||||||||||||| Sbjct 18100 AGGCACTTCCCTGTGCTCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAGT 18159 Query 26189 ATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248 || ||||| |||||| || ||| || | ||||| || | |||| Sbjct 18160 TCGTCGCCGATAGACTGCTGCTTTCTCTCGGAAACGAGAAGTACTACAAGTCGACCAACC 18219 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308 | |||||||| ||||| ||||| || ||| || |||||||||||||| || ||| | | Sbjct 18220 CATTCGACTTCATGGAGAACATCTCCCTGGCGGGCAAGACCAACTTCTTCGAGAAGCGCG 18279 Query 26309 TCGGCGACTATCAA 26322 ||| |||||| ||| Sbjct 18280 TCGCCGACTACCAA 18293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928802015086400