Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3654 244 1e-59 seq512 116 4e-21 >seq3654 Length=7047 Score = 244 bits (270), Expect = 1e-59 Identities = 1163/1818 (64%), Gaps = 59/1818 (3%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 |||||||| |||| ||||||||| | ||| |||| || || ||||||| | Sbjct 3073 TACTTTGGCTTCAAGACCCTTGAGCGGTCCTACCTTCTCCGCCTTGATGGCAAGGTTGCT 3132 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 || | || ||| ||||| | ||||| || || | ||||| ||||| || || ||||| Sbjct 3133 GAGAGGCCGCAGCACATGATTATGCGTGTTGCCGTTGGCATTCACGGCGAGGATATTGAG 3192 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCAA 75323 | | ||||||||| || ||||| |||| ||| |||| ||||| | |||| Sbjct 3193 AAGACCATCGAGACATACAACCTCATGTCTTCCAAA-TAT-TTCACACACGCTTCCCCAA 3250 Query 75324 CCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 | ||||||||||||||||||||| || || ||| |||| |||||| | ||| || Sbjct 3251 CACTCTTCAATGCTGGTACACCACAGGCC-CAGCTGTCATCCTGCTTCTTGGTCGACATG 3309 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 |||||||| || | |||||||||| || || | | |||||| ||||||||| Sbjct 3310 AAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACGTGTGCCATGATCTCAAAG 3369 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502 ||||| || || || || |||| || | | | |||| | | ||| Sbjct 3370 ACTGCTGGAGGCATCGGATTGAACATTCACCGTATCCGTGCCACTGGTGCATACATTGCC 3429 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || || || || | || | ||||| | || ||||| || || || ||| ||| || Sbjct 3430 GGTACCAACGGAAACTCGAACGGTATCGTCCCTATGCTCCGTGTCTTCAACAACACTGCA 3489 Query 75563 CGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAA 75616 | || || | || | || ||||| || | |||| ||||| | || Sbjct 3490 AGATACGTTGACCAGGGTGGCAACAAGCGTCCT---GGCGCTTTCGCCATCTACGTCGAG 3546 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676 |||||||| || ||| || | |||||||| || || || ||||| || | || || Sbjct 3547 CCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAGGAGGAA 3606 Query 75677 GCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 | || ||| | || | || | | || ||||| || || || ||||||||||| || Sbjct 3607 G-TCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGT 3665 Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACG 75794 ||| || || | ||| |||| | || || || || || || ||| | | |||| Sbjct 3666 CGAGAAGAACGGCGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGTTTGGCGGACG 3724 Query 75795 CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CA 75851 || || |||||||| || |||||| | || || ||||||||| | || Sbjct 3725 TCTACGGCGATGAGTTTGAGGCGCTCTACGAGAGCTACGAGAAGGAGGGTAAGGGTCGCA 3784 Query 75852 ATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACT 75910 | ||| | | || | | || | ||||| | | |||||| | || ||||| ||||| Sbjct 3785 A---GACCAT-CAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACA 3840 Query 75911 GGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTG 75970 |||| || | ||||| ||||||||||| || ||| ||||| ||||| ||||| | Sbjct 3841 GGAAACCCTTTCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTC 3900 Query 75971 GGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || || ||| ||||| || |||||||| || ||| | |||||| | | |||||| Sbjct 3901 GGTACCATCCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAG 3960 Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGC 76090 || || ||||| |||||||| | ||||| |||| ||||| | | | || Sbjct 3961 GTTGCCGTGTGCAACTTGGCATCCCTTGCCCTGCCAACATATGTTGACATGGCCAACGGC 4020 Query 76091 ACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGA 76150 |||| ||| | | || ||||| || ||||| || ||||| || || | ||| Sbjct 4021 ACTTATGACTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTTAAGAACTTGAACAAG 4080 Query 76151 GTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGA 76210 |||||||| || | || ||||| ||| || || || | || ||||| Sbjct 4081 ATCATTGACGTCAACTACTACCCCGTCGAGGAGGCCAGACGCAGCAACTTCCGTCACAGG 4140 Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTT 76270 || ||| | | ||||| || ||||| || |||| ||| | |||| | || Sbjct 4141 CCAGTTGCTGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCTTTC 4200 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 ||||| || |||||| | || ||| |||||||| ||||| || |||| | | Sbjct 4201 GATTCCCCCGAGGCCAAGTTCCTCAACTCTCAGATCTTTGAGACCATTTACCACG-GTGC 4259 Query 76331 CTGGA--GGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 | || | | || || |||| | || || | || ||||| | ||||| | Sbjct 4260 TTTGACCGCCTCCGTG-GAGCTGGCCCAGATTCACGGCACATACGAGACCTACGAGGGAT 4318 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAA 76446 |||||| ||| | || | ||| |||| || ||||||| || | || | | || Sbjct 4319 CTCCCGTGTCGAAGGGAGAGCTCCAGTACGACATGTGGG-GCGTTACCCCTACCGATC-T 4376 Query 76447 CTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 | |||||||| |||||||| | || ||| || | ||| | || ||| ||| | Sbjct 4377 GTGGGACTGGGACTCTCTCAAGGCTCAGATAAAGCAGCACGGTGTCCGCAACTCTCTCCT 4436 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 | || || ||||| || || |||||| | || || | || || || || || || Sbjct 4437 CGTTGCTCCTATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAGTGTTTCGA 4496 Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 |||||||| | ||||| ||| | | | ||| || || ||||| | ||||| Sbjct 4497 GCCATACACCTCGAACATTTACTCGCGCCGTGTCCTGGCTGGCGAGTTCCAAGTAGTCAA 4556 Query 76627 CAAGCACCTCG----TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGG 76682 | ||| | |||| ||| | | || ||||| ||||| | | |||||| Sbjct 4557 ----CCCCTGGTTGCTCAAGGACTTGGTCGACATGGGTCTGTGGTCTGACAACATGAAGA 4612 Query 76683 A---TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATA 76739 | | |||| | | | ||||| ||||| || || ||| | | ||||| | || | Sbjct 4613 ACCGTATCATCGCG---GACGGTGGCTCCATCCAGAACATCCCCAACATCCCTGCCGACA 4669 Query 76740 TCAAGAATCTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGG 76796 ||||| |||||| || || ||||| || | || | | | || | | |||| Sbjct 4670 TCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAG-CGTACCA--TCGTCCAGATGG 4726 Query 76797 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAG 76854 | || || ||||| ||||||||||| |||| ||| | || | |||| | Sbjct 4727 CTGCTGACCGTGGAGCCTTCATTGATC--AGTCCCAGTCCCTCAACATCCACATGAAGGA 4784 Query 76855 TCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAAC 76914 ||||| ||| |||| || | || ||||| | | ||||| | || ||||| || Sbjct 4785 CCCAACAATGGGCAAGATCACATCCATGCACTTTGCTGGTTGGAAGCTTGGCCTCAAGAC 4844 Query 76915 CGGAATGTACTATCTCCG 76932 ||| |||||||| ||||| Sbjct 4845 CGGCATGTACTACCTCCG 4862 >seq512 Length=30657 Score = 116 bits (128), Expect = 4e-21 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 |||||| | ||| | || || ||| |||||||||| | ||||| | | ||| | | Sbjct 17769 GCCATCGAGACTATTCCTTGCATTAAGAAGAAGGCTGACTGGGCTGTCAGGTGGATCCAA 17828 Query 65056 -ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114 |||| | || |||| ||| |||| || |||| ||||| || ||||||||||| Sbjct 17829 GACAAGGATTCTA-CCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTT 17887 Query 65115 CTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174 ||||||||| || ||| | |||| ||| | |||||||| || |||||| | ||||| Sbjct 17888 CTTCTCCGGCTCCTTCGCATCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCT 17947 Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 |||||| || || || || ||||| || |||||||||||| Sbjct 17948 GACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGGTCTCCAC 17990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596542120512800