Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq810 147 6e-30
seq512 116 1e-20
seq1166 93.3 1e-13
>seq810
Length=59582
Score = 147 bits (162), Expect = 6e-30
Identities = 219/311 (70%), Gaps = 0/311 (0%)
Strand=Plus/Plus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||||| | ||||| | ||||||||| || ||||||||| | || || || ||
Sbjct 51576 TCTTCCAAAGCCTTGACGAGACGACGCTGGATGTAACCAGTTTCGGCAGTCTTAACGGCG 51635
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691
|||||||| ||||| |||||||| ||||||| |||||||| | ||| |||| ||
Sbjct 51636 GTATCAATAAGACCCTCACGACCAGCCATAGCGTGGAAGAAGAACTCCGACGGTGTAAGA 51695
Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751
|| | | | ||| |||||||||| ||||| | ||| || || | || ||| ||
Sbjct 51696 CCTCTCAAGTACGAGTTCTCAACGAAGCCACGAGACTCAGGAGAGTAATCATCCTTTGTG 51755
Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811
|| ||||||||||| | || || | ||| | || |||||||| || || || ||||
Sbjct 51756 AAATGTGGCAGGGTGCGGTACTTGAATCCGAAGGGAATACGCTTACCCTCCACAGACTGC 51815
Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGCATTT 302871
||||| | || | ||||||| |||||||| | | |||||||| ||||
Sbjct 51816 TGTCCGACAAGCGCAGTCATCTGGGAAATATTGATAGTGGAACCCTTGGATCCAGATCGG 51875
Query 302872 ACCATAATAAC 302882
||||||||||
Sbjct 51876 GCCATAATAAC 51886
Score = 98.7 bits (108), Expect = 3e-15
Identities = 127/173 (73%), Gaps = 7/173 (4%)
Strand=Plus/Plus
Query 301782 GGATGGATTCTTTGTGTT--TTCCGATAGAGACAGAATTTCTTCAATACGGGGAACACCA 301839
|||||| |||| |||| || ||||| ||||||||| | | ||| || |||||
Sbjct 50765 GGATGGTGTCTTGATGTTGGTTGCGATATT--CAGAATTTCCTTCAGACGCGGCACACCG 50822
Query 301840 CGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATTCAGAGTTAATTGA 301899
| || ||||| |||||||| |||||||| || |||||||| || || || | ||
Sbjct 50823 AGAGTGACGTT---CTTGGACGACACACCAGCGAAATGGAAAGTGTTGAGCGTCATCTGT 50879
Query 301900 GTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTCTCCTGG 301952
|||| |||||||||||| || ||||||| ||||||||||| || || ||
Sbjct 50880 GTAGCAGGCTCACCAATAGACTGGGCCGCAAGAATACCAACCATCTCGCCAGG 50932
>seq512
Length=30657
Score = 116 bits (128), Expect = 1e-20
Identities = 201/287 (70%), Gaps = 4/287 (1%)
Strand=Plus/Plus
Query 133373 CTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAACGCCATTAG 133431
|| || || || |||||||| || | || | ||||| || | ||||| ||||| |
Sbjct 17718 CTCATCGACACATACATCAAGGAGCAGGCTCA-ACGCACATACCTCTTCAATGCCATC-G 17775
Query 133432 CGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGC 133490
|| | ||||||| ||||| ||||| ||||||||||| | | |||||||| ||||||
Sbjct 17776 AGACTATTCCTTGCATTAAGAAGAAGGCTGACTGGGCTGTCAGGTGGATCCAAGACAAGG 17835
Query 133491 GTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTG 133550
| | | ||||| ||||||||||| ||||| | || ||||| || || ||| |
Sbjct 17836 ATTCTACCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCG 17895
Query 133551 GTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTT 133610
| | ||| || ||||| ||||| || |||||||| | | |||| ||| || |
Sbjct 17896 GCTCCTTCGCATCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCT 17955
Query 133611 CTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
| ||||| || || || | ||||||| || ||||| || || |||
Sbjct 17956 CGAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCC 18002
>seq1166
Length=8473
Score = 93.3 bits (102), Expect = 1e-13
Identities = 112/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||| || ||||||||| ||||| || ||||| |||||||| | || || |
Sbjct 6667 TGGGCAATTGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATAAGATCAGGCACAATA 6726
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| ||| |||||| |||||||| | || | ||| || | ||||| ||||| |||||
Sbjct 6727 CCCTCACGAGTGAAAGGCATATCTTCTTGG-CGGTAAGTGATACCAATGGTTCCTTTTTG 6785
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||| |||||| |||||||||||||||
Sbjct 6786 ACCGTGGCGAGAAGCGAACTTATCACCAAT 6815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471748109511845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |