Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3654 147 2e-30 seq1689 102 7e-17 >seq3654 Length=7047 Score = 147 bits (162), Expect = 2e-30 Identities = 774/1221 (63%), Gaps = 46/1221 (4%) Strand=Plus/Minus Query 138431 CCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTA 138490 |||| ||||| || || |||||| || ||||| || | || |||||| || | Sbjct 4627 CCGCGATGATACGGTTCTTCATGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTGA 4568 Query 138491 TCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGT 138550 || | ||| | || || || || || |||| || || || ||||||||| Sbjct 4567 GCAACCAGGGGTTGACTACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTTCG 4508 Query 138551 TGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCA 138610 |||| | ||||| || | |||||| || |||||||| | |||| || || |||| Sbjct 4507 AGGTGTATGGCTCGAAACACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCA 4448 Query 138611 TGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACG 138670 | || || | ||||| || || | |||||| |||| || | ||||||| || Sbjct 4447 TAGGAGCAACGAGGAGAGAGTTGCGGACACCGTGCTGCTTTATCTGAGCCTTGAGAGAGT 4388 Query 138671 ACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAAC 138730 ||||||||||| |||| |||| | | |||||| |||||||| | | |||| Sbjct 4387 CCCAGTCCCACAGATCGGTAGGGGTAACGCCCCACATGTCGTACTGGAGCTCTCCCTTCG 4328 Query 138731 TTGCGGGACTGCCTTCGTACGAATCGTATACACCAA-ACTCTTGCGCCAACTCGTTGCTC 138789 ||||| || ||||| | |||||| || | ||| | |||| ||| | Sbjct 4327 ACACGGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGG-GCCAGCTCCACGGAG 4269 Query 138790 GCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCG 138849 || | ||||| | |||||| || || ||||| ||||| || ||||||| Sbjct 4268 GCGGTCAAAGCACCGTGGTAAATGGTCTCAAAGATCTGAGAGTTGAGGAACTTGGCCTCG 4209 Query 138850 GCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACT 138909 | | ||| | || | |||||| | ||| || || || || || || || || || Sbjct 4208 GGGGAATCGAAAGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACCAACA 4149 Query 138910 CCGACAGGGCGATGGCGCAGATTTGACGCTTTTG-CGGCTTCGATAGGATAATAGTTTAC 138968 | || || | || || | | ||| || | || | | |||| || || ||||| || Sbjct 4148 GCAACTGGCCTGTGACGGA-AGTTGCTGCGTCTGGCCTCCTCGACGGGGTAGTAGTTGAC 4090 Query 138969 ATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAA 139027 || ||||| ||||| || || || || |||| || | | | || | | | | Sbjct 4089 GTCAATGATCTTGTTCAAGTTCTTAACAACAACCTGTGTGACCT-CGTGAAGCTTCTGGA 4031 Query 139028 AATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACA--AATCGA 139085 | || || ||||| || | | | ||| ||| || |||| || || || Sbjct 4030 AGTCATAAGTGCC---------GTTGGCCATGTCAACATAT--GTTGGCAGGGCAAGGGA 3982 Query 139086 GGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAA 139145 || | ||||||||| || || || || ||| | ||| |||||||| || | || | Sbjct 3981 TGCCAAGTTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCAAAG 3922 Query 139146 ATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTT 139205 || | ||| ||||| | || | || ||||| || ||||| || ||||| || Sbjct 3921 GTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTT 3862 Query 139206 GTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTC 139265 ||| ||||| | || | || || || || | ||| | |||| | | | ||| Sbjct 3861 GTACAGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCA-AAGCT 3803 Query 139266 CCTAG--CTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAG 139319 || | |||| || ||| | | || | | || ||||| | |||||||| Sbjct 3802 TCTGGGCCTTG-ATGGTCTTGCGACCCTTACCCTCCTTC----TCGTAGCTCTCGTAGAG 3748 Query 139320 TTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAG 139379 | || || || |||||| |||| | | | | | || | || || |||||||| Sbjct 3747 CGCCTCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGGGCACATGAG 3688 Query 139380 CGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAA 139439 | ||| |||||||| || ||| ||| ||||||| ||||| || ||||| | |||| | Sbjct 3687 AGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTA 3628 Query 139440 CAGCAAATCGCGCGC-----CTTCTTATCTTCCGAACCCATGTTACGTT-TCATGTTAAG 139493 | ||| || || || |||| | ||||| || | | || ||| || || Sbjct 3627 GAACAAGTCACGGGCACGGACTTCCTCCTTTCCG------TGGTTCTTTCTCAAGTCCAG 3574 Query 139494 GAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG--- 139550 ||| ||||| || || ||||||||||| || | |||||||| | ||||| || Sbjct 3573 GAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTT 3514 Query 139551 TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAG 139610 |||||||| || || |||| || | ||| || ||||| || || | ||| || | | Sbjct 3513 GTTGCCACCCTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGAT 3454 Query 139611 ACCGCTCGCTGTTCCGTTGGT 139631 |||| ||| |||||||||| Sbjct 3453 ACCGTTCGAGTTTCCGTTGGT 3433 >seq1689 Length=16827 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || |||||||| || || || | | Sbjct 15258 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACGATTACGCTTGAGGTGGAGTCGTCG 15317 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| |||||||| || || || ||||| || || Sbjct 15318 GATACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGCATTCCTCCGGACCAG 15377 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || |||||||||||| | | | |||| || || ||| Sbjct 15378 CAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAAC 15437 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| ||||| ||||| || || ||||| Sbjct 15438 ATTCAGAAGGAGTCGACTCTGCATTTGGT 15466 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACA 24786 || || || || || || ||||| || || || |||| || | || |||| ||| | Sbjct 14826 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACCATCGACAACGTTAAGAGC 14885 Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 || |||||||||||| || ||||| || || || || |||||| ||||||| ||||| || Sbjct 14886 AA-GATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAA 14944 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 || || ||||| | | | | || || || ||||| || ||||| ||||| || || Sbjct 14945 GCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 15004 Query 24907 CTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| | || |||| || || Sbjct 15005 CTTGGTCCTCCGTCTGCGTGGTGG 15028 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || |||||||| ||||| || | | Sbjct 15486 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 15545 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||| || || || || || || || || Sbjct 15546 GATACCATCGATAACGTCAAGTCGAAGATCCAAGATAAGGAGGGCATTCCCCCGGACCAG 15605 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||||| ||||| | | |||| ||||| ||| Sbjct 15606 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCTGATTACAAC 15665 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || ||||| || || ||||| |||| Sbjct 15666 ATCCAGAAGGAGTCTACGCTACATCTTG 15693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449876876591800