Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1166 109 2e-18 >seq1166 Length=8473 Score = 109 bits (120), Expect = 2e-18 Identities = 125/163 (77%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || |||||||||||||||||||| | |||||||||| || || Sbjct 6657 CTCAATCAAATGGGCAATTGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATAAGATC 6716 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802 ||| | || | | | | | |||||||||||||||||| |||| | | | ||||| Sbjct 6717 AGG-CACAATACCCTCACGAG--TGAAAGGCATATCTTCTTGGCGGTA-AGTGATACCAA 6772 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 | ||||| |||||| |||| | ||||| ||||| |||||||| Sbjct 6773 TGGTTCCTTTTTGACCGTGGCGAGAAGCGAACTTATCACCAAT 6815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951882239358680