Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 104 2e-17
seq512 86.0 6e-12
>seq1689
Length=16827
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
||||||||| | | ||||| || |||||||||||||| || ||| || ||| ||
Sbjct 15467 AACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTC 15408
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
||||| ||||| | |||| || ||||| || || ||||| ||||| || || ||
Sbjct 15407 CAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTG 15348
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
||| || || | | || | ||||| | || |||||| || | ||| | ||| ||
Sbjct 15347 AATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCCACCTCAAGCGTAATCGTCTT 15288
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| ||||| || | ||||||||||||
Sbjct 15287 GCCAGTAAGAGTCTTGACGAAAATCTGCAT 15258
>seq512
Length=30657
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 47046 GAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGC 47105
|| || || | |||||| ||||||| || |||| ||| || ||| || |||| |||
Sbjct 18066 GAAGCCGTCACCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGTGCTCTGCTCGGC 18125
Query 47106 ATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 47165
|||||||| | | ||| |||| |||||||| || || ||| | ||| || |
Sbjct 18126 ATGAACGCCAACTTGATGAAGCAATACATTGAGTTCGTCGCCGATAGACTGCTGCTTTCT 18185
Query 47166 CTCGGACAACCGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCG 47225
|||||| | ||| || | || | || || || || || ||| | ||||| ||
Sbjct 18186 CTCGGAAACGAGAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACATCTCC 18245
Query 47226 CTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCG 47262
|| | |||||| ||||| || |||||||| || ||||
Sbjct 18246 CTGGCGGGCAAGACCAACTTCTTCGAGAAGCGCGTCG 18282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476589246096600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |