Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq512 241 2e-57
seq3654 109 8e-18
>seq512
Length=30657
Score = 241 bits (266), Expect = 2e-57
Identities = 365/507 (72%), Gaps = 12/507 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| || || |||||||| |||||| | || |
Sbjct 17447 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCATCTTTCTGGACCGCAGAGGAGATTGATC 17505
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTCATCA 1455891
|| | ||| | ||||| || || | |||||| |||||| | ||||||
Sbjct 17506 TCTCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGACGATGAGCGCTACTTCATCT 17565
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||||| ||||| ||| ||||||||| || || || || ||||||||| ||
Sbjct 17566 CCCACGTTCTCGC-TTTCTTCGCCGCCTCTGACGGAATTGTCAACGAGAACCTCCTCGAG 17624
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | | ||||||||| | |||||||| || | || ||||| ||||| |||
Sbjct 17625 CGCTTCAGCAGTGAGGTCCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATG 17684
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
||||| ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | |
Sbjct 17685 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAG 17744
Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130
| | | | || ||||||| |||||||| || | || | | | ||| |||||
Sbjct 17745 GCTCA-ACGCACATACCTCTTCAATGCCATCGAGACTATTCCTTGCATTAAGAAGAAGGC 17803
Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGG-AGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189
|||||||| | | ||||||| |||| | || || || ||||||| |||| |||||
Sbjct 17804 TGACTGGGCTGTCAGGTGGATC--CAAGACAAGGATTCTAC-CTTTGCCCAGCGTCTCGT 17860
Query 1456190 CGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248
| ||||||||| |||||||| ||||| ||||| ||| ||| |||| || |||||
Sbjct 17861 TGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCATCCATTTTCTGGCT 17920
Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||||||| ||||||||| | || ||
Sbjct 17921 CAAGAAGCGTGGCCTCATGGCTGGCCT 17947
Score = 89.7 bits (98), Expect = 7e-12
Identities = 170/245 (69%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590
||| |||||| |||||| | ||||| | | ||| | || || || || ||||
Sbjct 18065 CGAAGCCGTCACCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGTGCTCTGCTCGG 18124
Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650
||||||||||| | | ||| || |||||||| || |||||||| | |||||
Sbjct 18125 CATGAACGCCAACT-TGATGAAGCAATACATTGAGTTC-GTCGCCGATAGACTGCTGCTT 18182
Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710
| ||||| || ||||| ||||| | || ||||||| ||| | |||||| ||
Sbjct 18183 TCTCTCGGAAACG-AGAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACAT 18241
Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGG 1456769
||| || | ||||||||||||||| |||||| ||||| | ||| ||| ||| | ||
Sbjct 18242 CTCCCTGGCGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGG 18301
Query 1456770 CGTCA 1456774
||||
Sbjct 18302 TGTCA 18306
>seq3654
Length=7047
Score = 109 bits (120), Expect = 8e-18
Identities = 179/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
|| || ||||| ||||| || || || | | ||| || || ||||| || | |||
Sbjct 3247 CCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGAC 3306
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || ||||| ||||||||||| |||||| ||| || | |||||
Sbjct 3307 ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACGTGTGCCATGATCTCA 3366
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| | || || |||||||| || | ||| | || ||| | || || ||| |
Sbjct 3367 AAGACTGCTGGAGGCATCGGATTGAACATTCACCGTATCCGTGCCACTGGTGCATACATT 3426
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || |||||||| | || ||||| | || || ||||| || || || ||| ||||
Sbjct 3427 GCCGGTACCAACGGAAACTCGAACGGTATCGTCCCTATGCTCCGTGTCTTCAACAACACT 3486
Query 260165 GCGCGCTACGTCGACCAG 260182
|| | ||||| ||||||
Sbjct 3487 GCAAGATACGTTGACCAG 3504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177455774976970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |