Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq512 129 8e-25 >seq512 Length=30657 Score = 129 bits (142), Expect = 8e-25 Identities = 555/867 (64%), Gaps = 18/867 (2%) Strand=Plus/Minus Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372 ||| || || | |||||||| || | ||||| |||||||| || || || ||||| | Sbjct 18308 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCGC 18249 Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC 39432 || || || || |||||||| || || || || || | || || | || | ||| Sbjct 18248 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTTCC 18189 Query 39433 TAATTCTGAAATCAA---TCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489 | |||| || |||||| || || || || |||||| ||||||| | Sbjct 18188 GAGA---GAAAGCAGCAGTCTATCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 18132 Query 39490 ATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTAC 39549 ||||| || | || | || || ||||| || | ||||| | |||||| || Sbjct 18131 GTTCATGCCGAGCAGAGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGGTGAC 18072 Query 39550 GGCCTCTGTTATTATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTA 39607 ||| || || || | || | || || ||| | || || | ||| | || Sbjct 18071 GGCTTCGGTAATGA-CG-TCTTGGACGGCCTTCTTGCTTGGGCGGTGCTTGAGGTGGGAG 18014 Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 || | | ||||||||||||| || || ||||| || | || | ||||| || Sbjct 18013 AAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAG 17954 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || |||| ||| || |||||||| |||||||| || |||| || || || || Sbjct 17953 AAGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCG 17894 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 || |||||||| || || || || ||||| ||||| || | || | | | | ||| Sbjct 17893 GAGAAGAAGATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCC 17834 Query 39788 TT---ATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 || || |||||| | ||||| ||||| |||||||| | ||||| || || || Sbjct 17833 TTGTCTTGGATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCG 17774 Query 39845 ATAGCATTAAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAG 39903 || ||||| ||||| | |||| || | | || || | ||||| || || | || Sbjct 17773 ATGGCATTGAAGAGGT-ATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAG 17715 Query 39904 ACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGC 39963 || | || | || ||||| || ||| || || || ||||| || || | || Sbjct 17714 GGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGC 17655 Query 39964 TTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATC 40023 || | ||||| ||||| | || | || | || || || || ||||| || Sbjct 17654 CTCTGGGATTTGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTC 17595 Query 40024 ACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTGTCA-A 40080 | ||||| || || || | || || || || || |||||| | || | Sbjct 17594 AGAGGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACG 17535 Query 40081 TTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGC 40140 || |||||||| | | || || || | ||| | || || || ||||| || || || Sbjct 17534 GTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAAGATGC 17475 Query 40141 CTCTGCCTTTTTGTACATGTTCCATAT 40167 ||| ||||| |||||||| | ||| || Sbjct 17474 CTCGGCCTTCTTGTACATCTGCCAGAT 17448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686877159263400