Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3654 241 2e-58 seq512 167 3e-36 >seq3654 Length=7047 Score = 241 bits (266), Expect = 2e-58 Identities = 1112/1743 (64%), Gaps = 55/1743 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| || |||||||| || ||||||| || | ||||| || | Sbjct 4862 CGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAACCAGCAAAGTGCATGGATGTG 4803 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | ||||| | |||| || ||| | ||||| ||||| |||||| Sbjct 4802 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAG 4743 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTC 118013 ||| || || || ||||| | | | | | | || | || ||||| || ||| Sbjct 4742 GCTCCACGGTCAGCAGCCATCTGGACGA--TGGTACG-CTGGGAGATCTCCCAGACGGTC 4686 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 |||||||| ||| || || | ||||| | ||| || |||||||| ||||| || Sbjct 4685 TTGTAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTCTGGATGGAGCCACCGTCC 4626 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCT----C 118129 || || | | |||||| | | ||||| ||||| || | | |||| | Sbjct 4625 GCGATGATACGGTTCTTCATGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTGAGC 4566 Query 118130 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 118189 || || | ||||| || ||||| || || ||| || | | || || || Sbjct 4565 AACCAGGGG----TTGACTACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTT 4510 Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249 | ||||||||||| || ||||| ||| || | || |||| ||||| || ||||| Sbjct 4509 CGAGGTGTATGGCTCGAAACACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGG 4450 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC 118309 ||| || || | ||| || ||| |||| ||| | | | | || | ||||||||| Sbjct 4449 CATAGGAGCAACGAGGAGAGAGTTGCGGACACCGTGCTGCTTTATCTGAGCCTTGAGAGA 4390 Query 118310 GTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTGCCACATATCAAACTGGAGGATAC 118365 ||||||||| | || | | || | ||| ||||| || ||||||| | Sbjct 4389 GTCCCAGTCCCACA-GATCGGTAGGGGTAACGCCC---CACATGTCGTACTGGAGCTCTC 4334 Query 118366 CTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC-- 118423 | | ||| | || |||||||| | ||||| |||| ||| | || || |||| || Sbjct 4333 CCTTCGACACGGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCA 4274 Query 118424 -GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCT 118482 |||| | | | || |||| || || || ||||| || ||| || | || Sbjct 4273 CGGAGGCGGTC---AAAGCACCGTGGTAAATGGTCTCAAAGATCTGAGAGTTGAGGAACT 4217 Query 118483 TGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGA 118542 |||||||| |||||| || | || ||| | ||| |||| || ||||| |||| Sbjct 4216 TGGCCTCGGGGGAATCGAAAGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGA 4157 Query 118543 CACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCTCCACGGGATAA 118601 |||| | ||| ||| | || | | || | || | || ||| ||||| || Sbjct 4156 CACCAACAGCAACTGGCCTGTGACGGAAGTTGCTGCGTCTG-GCCTCCTCGACGGGGTAG 4098 Query 118602 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 118661 | || || || | | | || | || || ||||||| ||||| || |||||| Sbjct 4097 TAGTTGACGTCAATGATCTTGTTCAAGTTCTTAACAACAACCTGTGTGACCTCGTGAAGC 4038 Query 118662 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 || | | | ||| || ||| | | | ||||| | || ||||| | || ||| Sbjct 4037 TTCTGGAAGTCATAAGTGCCGTTGGCCATGTCAACATATGTTGGCAGGGCAAGGGATGCC 3978 Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781 | || ||||| | |||||| ||| |||||| | ||| || ||||| | ||| Sbjct 3977 AAGTTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCAAAGGTTG 3918 Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841 || || ||||| || | |||||| || || ||| ||| || ||||||||||| Sbjct 3917 GAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAC 3858 Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGC 118900 |||||| | || | || ||||| || || |||| |||||| | | ||| | | || | Sbjct 3857 AGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGG 3798 Query 118901 AGCTGGCACAGTGGCGTTGGCTCGC---CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTC 118957 || | ||| ||| | | ||||| | |||||| | |||||| || || Sbjct 3797 GCCTTGA----TGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCTCTCGTAGAGCGCCTC 3742 Query 118958 AAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACC 119016 |||||| || || | | || | | || || || || |||| || | ||||| || Sbjct 3741 AAACTCATCGCCGTAGACGTCCGCCAAACCAGG-GCATTCGTTGGGGCACATGAGAGTCC 3683 Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076 | | || || ||| || |||||||||||||| || ||||||||||| || |||| | Sbjct 3682 AGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAACA 3623 Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136 || || || |||| || | || || || | ||| |||| || || | || Sbjct 3622 AGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGA 3563 Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAG 119190 |||||||||||| || || | ||| | |||| | || | |||| ||| Sbjct 3562 CATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCC---AGGACGCTTGTTGCCAC 3506 Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250 |||||| || || || |||||| ||| || ||||| ||||| || | |||||| | | Sbjct 3505 CCTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCGTTCG 3446 Query 119251 ATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATAC 119310 | | || || || || ||| | | |||| | || | ||| |||| || | Sbjct 3445 AGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAATGTTCAATC 3386 Query 119311 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCAT 119370 | || || || || ||||||||| || ||| | |||| || | ||||| || | Sbjct 3385 CGATGCCTCCAGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCCT 3326 Query 119371 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTA 119429 | || || |||| | ||| | ||||||| |||| || |||||| |||||| Sbjct 3325 CAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTGGTGTA 3267 Query 119430 CCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGG--GACATCTTGTCGT 119487 ||||| |||||||| ||||| | ||||| |||| ||| |||| ||||| || || Sbjct 3266 CCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-ATA-TTTGGAAGACATGAGGTTGT 3209 Query 119488 AGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547 | ||||| | | ||| || || |||||||| || | | || ||||||| || Sbjct 3208 ATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCA 3149 Query 119548 TGT 119550 ||| Sbjct 3148 TGT 3146 >seq512 Length=30657 Score = 167 bits (184), Expect = 3e-36 Identities = 532/811 (66%), Gaps = 13/811 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| | || ||||||||||||||||| ||||| || ||| | ||| |||||||| Sbjct 18289 TAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCGCCAGGGAGATGTTCTCCATG 18230 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAA-ATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || |||||||| | || || | | | || | ||| | || || | Sbjct 18229 AAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTT-TCCGAGAGAAAGCAGCAGTCT 18171 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| |||||||||| | |||| | || |||||| |||| || ||| Sbjct 18170 ATCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGAGCACA 18111 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || | |||| ||| ||| ||| || ||||| | || | | || Sbjct 18110 GGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGGTGACGGCTTCGGTAATGACGTCTTG 18051 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCT 130025 | || || | ||| || | | || | || |||||| ||| || || Sbjct 18050 GACGGCCTTCTTGCTTGGGCGGT-GCTTGAGGTGGGAGAAGAGGAGGCAGGCGAAGTCAG 17992 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 ||||||||||||||||||||||||||| || ||||||||| ||| || | |||||| | Sbjct 17991 TGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGC 17932 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||| | ||||||||| | || ||||| ||||||||||| ||||| || Sbjct 17931 CACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGG 17872 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATC 130204 || || |||| |||||||| ||||||| | | |||| | | |||| | | Sbjct 17871 CGGCAAAGGCAACGAGACGCTGGGCAAAGG-TAGAATCCTTGTCTTGGATCCACCTGACA 17813 Query 130205 GCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTC 130264 ||||| | ||||| |||| || || || | |||| ||| || | ||||| | | Sbjct 17812 GCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTGAAGAGGTATGTG 17753 Query 130265 TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACC 130324 || | | || |||||||| | || ||||| || ||||| ||| | || | Sbjct 17752 CGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATG 17693 Query 130325 ATTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATC 130383 | || || ||| || || ||||||| |||| || || || || |||||| | Sbjct 17692 TTCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCCTCTGGGATTTGGACCTCA-C 17635 Query 130384 TGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCA 130442 ||| || | | || ||||| |||||||| || || | || || || || | Sbjct 17634 TGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCGAAGAAAGCGA 17575 Query 130443 GGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGAT 130499 | | | ||||| | | |||| ||||| | || | |||||||||| ||| | Sbjct 17574 GAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAGTCGTGAAGGT 17515 Query 130500 CCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||| |||||||| | |||||| || ||||| Sbjct 17514 CCTTGGAGAGATCAATCTCCTCTGCGGTCCA 17484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618406713328600