Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 288 1e-72
seq512 141 1e-28
>seq3654
Length=7047
Score = 288 bits (318), Expect = 1e-72
Identities = 954/1460 (65%), Gaps = 33/1460 (2%)
Strand=Plus/Plus
Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTC-TTGAT 104214
|| ||||| |||| ||||||||| | ||| |||| || || ||||| ||| |
Sbjct 3073 TACTTTGGCTTCAAGACCCTTGAGCGGTCCTACCTTCTCCGCCTTGATGGCAAGGTTGCT 3132
Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274
| | | || ||| ||||| | ||||| || ||| | || ||||| || || || |||||
Sbjct 3133 G-AGAGGCCGCAGCACATGATTATGCGTGTTGCCGTTGGCATTCACGGCGAGGATATTGA 3191
Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCA 104332
| | ||||||||| || ||||| |||| ||| |||| ||||| | |||
Sbjct 3192 GAAGACCATCGAGACATACAACCTCATGTCTTCCAAA-TAT-TTCACACACGCTTCCCCA 3249
Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392
|| ||||||||||||||||||||| |||| |||| |||||| | ||| ||
Sbjct 3250 ACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGACATG 3309
Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452
|||||||| || | |||||||||| || || | | |||||| |||||||||
Sbjct 3310 AAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACGTGTGCCATGATCTCAAAG 3369
Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512
||||| || || || || |||| || | | | |||| | | |||
Sbjct 3370 ACTGCTGGAGGCATCGGATTGAACATTCACCGTATCCGTGCCACTGGTGCATACATTGCC 3429
Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572
|| || || || | || | ||||| | || ||||| || || || ||| ||| ||
Sbjct 3430 GGTACCAACGGAAACTCGAACGGTATCGTCCCTATGCTCCGTGTCTTCAACAACACTGCA 3489
Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626
| || || | || | ||| ||||| || || |||| |||| | |||
Sbjct 3490 AGATACGTTGACCAGGGTGGCAACAAGCGTCCT---GGCGCTTTCGCCATCTACGTCGAG 3546
Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686
||||||||||||||| || | |||||||| || ||| | ||||| || | |||||
Sbjct 3547 CCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAGGAGGAA 3606
Query 104687 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 104746
| || ||| || | |||| |||||||||||| || ||||||||||||||| | ||
Sbjct 3607 GTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTC 3666
Query 104747 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGC 104805
||| ||| ||| | ||| ||||| | || || || || || |||||| | | || |
Sbjct 3667 GAGAAGAACGGCGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGTTTGGCGGACGT 3725
Query 104806 CGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC 104865
| || || |||||||| || || ||| | |||||| | || ||| || | | ||
Sbjct 3726 CTACGGCGATGAGTTTGAGGCGCTCTACGAGAGCTACGAGAAGGAGGGTAAGG-GTC-GC 3783
Query 104866 --GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 104922
||| | | || | || | | ||| | | |||||| ||||||| || ||||| ||
Sbjct 3784 AAGACCAT-CAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGG 3842
Query 104923 TACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 104982
| || | |||||| ||||| || ||||| |||| ||||| || || ||||| | ||
Sbjct 3843 AAACCCTTTCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 3902
Query 104983 TGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 105042
| ||| || ||||| || || ||||| || | || | | | | |||||||
Sbjct 3903 TACCATCCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAGGT 3962
Query 105043 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-- 105100
|| ||||| ||| | ||||| | || || || | ||||| || || | ||| |
Sbjct 3963 TGCCGTGTGCAACTTGGCATCCCTTGCCCTGCCAACATATGTTGA--CATGGCCAACGGC 4020
Query 105101 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160
|| | ||| | | || || ||||| || || | ||| || ||| | ||||
Sbjct 4021 ACTTATGACTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTTAAGAACTTGAACAAG 4080
Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220
| ||||| || | |||||||| ||| || | || | | ||| |
Sbjct 4081 ATCATTGACGTCAACTACTACCCCGTCGAGGAGGCCAGACGCAGCAACTTCCGTCACAGG 4140
Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 105280
||| ||| | | ||||| |||||||| || |||| |||| | | |||| | ||
Sbjct 4141 CCAGTTGCTGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCTTTC 4200
Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
|||||| ||| || ||| |||| | | || ||||||||||| || |||| |||
Sbjct 4201 GATTCCCCCGAGGCCAAGTTCCTCAACTCTCAGATCTTTGAGACCATTTACCACGGTGCT 4260
Query 105341 CTTGAGGCGAGTTC--AGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398
|||| || | | ||| |||| || || | || |||| || |||| ||||| |
Sbjct 4261 -TTGA-CCGCCTCCGTGGAGCTGGCCCAGATTCACGGCACATACGAGACCTACGAGGGAT 4318
Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCAC 105457
|||| | || | || | ||| || | || ||||||| || | || | | ||
Sbjct 4319 CTCCCGTGTCGAAGGGAGAGCTCCAGTACGACATGTGGG-GCGTTACCCCTACCGATCTG 4377
Query 105458 TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517
| |||||||| ||||||||| | || ||| || | ||| | || ||| |||||||
Sbjct 4378 TGGGACTGGGACTCTCTCAAGGCTCAGATAAAGCAGCACGGTGTCCGCAACTCTCTCCTC 4437
Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577
| ||||| ||||| || || |||||| | || || | || || || || || ||
Sbjct 4438 GTTGCTCCTATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAGTGTTTCGAG 4497
Query 105578 CCCTACACGACGAACATCTA 105597
|| ||||| ||||||| ||
Sbjct 4498 CCATACACCTCGAACATTTA 4517
>seq512
Length=30657
Score = 141 bits (156), Expect = 1e-28
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773
||||| | |||||| | || |||| || ||| | ||||| || || |||||| | | |
Sbjct 17760 CTCTTCAATGCCATCGAGACTATTCCTTGCATTAAGAAGAAGGCTGACTGGGCTGTCAGG 17819
Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832
||| | | |||| | | | ||||||| |||| ||| | || ||||| || ||
Sbjct 17820 TGGATCCAAGACAAGGATTC-TACCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGA 17878
Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892
||||||||||||||| || |||||| | |||| |||||||||||||| || |||||
Sbjct 17879 GGGTATCTTCTTCTCCGGCTCCTTCGCATCCATTTTCTGGCTCAAGAAGCGTGGCCTCAT 17938
Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
| | || || |||||| |||||||| ||||| ||||||||||| ||||||
Sbjct 17939 GGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGGTCTCCAC 17990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583233933549400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |