Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3654 288 1e-72 seq512 141 1e-28 >seq3654 Length=7047 Score = 288 bits (318), Expect = 1e-72 Identities = 954/1460 (65%), Gaps = 33/1460 (2%) Strand=Plus/Plus Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTC-TTGAT 104214 || ||||| |||| ||||||||| | ||| |||| || || ||||| ||| | Sbjct 3073 TACTTTGGCTTCAAGACCCTTGAGCGGTCCTACCTTCTCCGCCTTGATGGCAAGGTTGCT 3132 Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274 | | | || ||| ||||| | ||||| || ||| | || ||||| || || || ||||| Sbjct 3133 G-AGAGGCCGCAGCACATGATTATGCGTGTTGCCGTTGGCATTCACGGCGAGGATATTGA 3191 Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCA 104332 | | ||||||||| || ||||| |||| ||| |||| ||||| | ||| Sbjct 3192 GAAGACCATCGAGACATACAACCTCATGTCTTCCAAA-TAT-TTCACACACGCTTCCCCA 3249 Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392 || ||||||||||||||||||||| |||| |||| |||||| | ||| || Sbjct 3250 ACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGACATG 3309 Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452 |||||||| || | |||||||||| || || | | |||||| ||||||||| Sbjct 3310 AAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACGTGTGCCATGATCTCAAAG 3369 Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512 ||||| || || || || |||| || | | | |||| | | ||| Sbjct 3370 ACTGCTGGAGGCATCGGATTGAACATTCACCGTATCCGTGCCACTGGTGCATACATTGCC 3429 Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || || || || | || | ||||| | || ||||| || || || ||| ||| || Sbjct 3430 GGTACCAACGGAAACTCGAACGGTATCGTCCCTATGCTCCGTGTCTTCAACAACACTGCA 3489 Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626 | || || | || | ||| ||||| || || |||| |||| | ||| Sbjct 3490 AGATACGTTGACCAGGGTGGCAACAAGCGTCCT---GGCGCTTTCGCCATCTACGTCGAG 3546 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686 ||||||||||||||| || | |||||||| || ||| | ||||| || | ||||| Sbjct 3547 CCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAGGAGGAA 3606 Query 104687 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 104746 | || ||| || | |||| |||||||||||| || ||||||||||||||| | || Sbjct 3607 GTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTC 3666 Query 104747 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGC 104805 ||| ||| ||| | ||| ||||| | || || || || || |||||| | | || | Sbjct 3667 GAGAAGAACGGCGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGTTTGGCGGACGT 3725 Query 104806 CGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC 104865 | || || |||||||| || || ||| | |||||| | || ||| || | | || Sbjct 3726 CTACGGCGATGAGTTTGAGGCGCTCTACGAGAGCTACGAGAAGGAGGGTAAGG-GTC-GC 3783 Query 104866 --GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 104922 ||| | | || | || | | ||| | | |||||| ||||||| || ||||| || Sbjct 3784 AAGACCAT-CAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGG 3842 Query 104923 TACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 104982 | || | |||||| ||||| || ||||| |||| ||||| || || ||||| | || Sbjct 3843 AAACCCTTTCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 3902 Query 104983 TGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 105042 | ||| || ||||| || || ||||| || | || | | | | ||||||| Sbjct 3903 TACCATCCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAGGT 3962 Query 105043 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-- 105100 || ||||| ||| | ||||| | || || || | ||||| || || | ||| | Sbjct 3963 TGCCGTGTGCAACTTGGCATCCCTTGCCCTGCCAACATATGTTGA--CATGGCCAACGGC 4020 Query 105101 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 || | ||| | | || || ||||| || || | ||| || ||| | |||| Sbjct 4021 ACTTATGACTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTTAAGAACTTGAACAAG 4080 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 | ||||| || | |||||||| ||| || | || | | ||| | Sbjct 4081 ATCATTGACGTCAACTACTACCCCGTCGAGGAGGCCAGACGCAGCAACTTCCGTCACAGG 4140 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 105280 ||| ||| | | ||||| |||||||| || |||| |||| | | |||| | || Sbjct 4141 CCAGTTGCTGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCTTTC 4200 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 |||||| ||| || ||| |||| | | || ||||||||||| || |||| ||| Sbjct 4201 GATTCCCCCGAGGCCAAGTTCCTCAACTCTCAGATCTTTGAGACCATTTACCACGGTGCT 4260 Query 105341 CTTGAGGCGAGTTC--AGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 |||| || | | ||| |||| || || | || |||| || |||| ||||| | Sbjct 4261 -TTGA-CCGCCTCCGTGGAGCTGGCCCAGATTCACGGCACATACGAGACCTACGAGGGAT 4318 Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCAC 105457 |||| | || | || | ||| || | || ||||||| || | || | | || Sbjct 4319 CTCCCGTGTCGAAGGGAGAGCTCCAGTACGACATGTGGG-GCGTTACCCCTACCGATCTG 4377 Query 105458 TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 | |||||||| ||||||||| | || ||| || | ||| | || ||| ||||||| Sbjct 4378 TGGGACTGGGACTCTCTCAAGGCTCAGATAAAGCAGCACGGTGTCCGCAACTCTCTCCTC 4437 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577 | ||||| ||||| || || |||||| | || || | || || || || || || Sbjct 4438 GTTGCTCCTATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAGTGTTTCGAG 4497 Query 105578 CCCTACACGACGAACATCTA 105597 || ||||| ||||||| || Sbjct 4498 CCATACACCTCGAACATTTA 4517 >seq512 Length=30657 Score = 141 bits (156), Expect = 1e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | |||||| | || |||| || ||| | ||||| || || |||||| | | | Sbjct 17760 CTCTTCAATGCCATCGAGACTATTCCTTGCATTAAGAAGAAGGCTGACTGGGCTGTCAGG 17819 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | | | ||||||| |||| ||| | || ||||| || || Sbjct 17820 TGGATCCAAGACAAGGATTC-TACCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGA 17878 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||||| || |||||| | |||| |||||||||||||| || ||||| Sbjct 17879 GGGTATCTTCTTCTCCGGCTCCTTCGCATCCATTTTCTGGCTCAAGAAGCGTGGCCTCAT 17938 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 | | || || |||||| |||||||| ||||| ||||||||||| |||||| Sbjct 17939 GGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGGTCTCCAC 17990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583233933549400