Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 205 1e-47
seq904 136 4e-27
seq512 127 2e-24
>seq3654
Length=7047
Score = 205 bits (226), Expect = 1e-47
Identities = 477/712 (67%), Gaps = 22/712 (3%)
Strand=Plus/Plus
Query 53243 GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300
||||| ||| || | ||| ||||| || || || ||||| | ||||| || ||||
Sbjct 3202 GAGACATACAACCTCATGTCTTCCAAA--TATTTCACACACGCTTCCCCAACACTCTTCA 3259
Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360
| |||||||| || | ||| |||| ||||||| |||| | |||||||| ||
Sbjct 3260 ATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGACATGAAGGAGGATA 3319
Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420
|| || || ||||| || || |||||| ||||||| ||||| ||| | || |
Sbjct 3320 GTATTGAGGGTATCTATGACACACTCAAGACGTGTGCCATGATCTCAAAGACTGCTGGAG 3379
Query 53421 GTATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAA 53478
| ||||| | || || | ||| |||||| | || || || || || ||
Sbjct 3380 GCATCGGATTGAACAT-TC-ACCGTATCCGTGCCACTGGTGCATACATTGCCGGTACCAA 3437
Query 53479 CGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGT 53538
||| | | | || ||||| ||||||||||| |||||||||||||| || | |||||
Sbjct 3438 CGGAAACTCGAACGGTATCGTCCCTATGCTCCGTGTCTTCAACAACACTGCAAGATACGT 3497
Query 53539 CAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGC 53598
|||||||||| ||||| || | |||||||||||| ||||||| ||||||||
Sbjct 3498 TGACCAGGGTGGCAACAAGCGTCCTGGCGCTTTCGCCATCTACGTCGAGCCATGGCACGC 3557
Query 53599 CGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCG 53658
|| | | ||||| || || || | ||| || || | || || | || |||
Sbjct 3558 GGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAGGAGGAAGTCCGTGCCCG 3617
Query 53659 TGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717
|||| |||| ||| ||||| ||||| || || ||||||||| | || |||||| |||
Sbjct 3618 TGACTTGTTCTAC-GCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAACG 3676
Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777
|| ||| || |||||||| ||||| ||||| || | || |||||||| || |
Sbjct 3677 GCGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGTTTGGCGGACGTCTACGGCGATG 3736
Query 53778 AGTTTAACGAGATGTATCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGG 53831
||||| | | | | || || ||| | | | |||| ||| ||||
Sbjct 3737 AGTTTGAGGCGCTCTACGAGAGCTACGAGAAGGAGGGTAAGGGTCGC------AAGACCA 3790
Query 53832 TCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGT 53891
||||||| | || | ||| | | || ||| || ||| ||||| |||| || |
Sbjct 3791 TCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTT 3850
Query 53892 ACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
|||| ||||||||| | |||| |||||||||||||||||| ||||
Sbjct 3851 TCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 3902
Score = 100 bits (110), Expect = 3e-16
Identities = 297/450 (66%), Gaps = 15/450 (3%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || ||||| || || ||||| || || || || | ||||| | ||| |
Sbjct 4423 CGCAACTCTCTCCTCGTTGCTCCTATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTC 4482
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||| ||||| | ||||| ||| |||||| ||| || || |||
Sbjct 4483 AACGAGTGTTTCGAGCCATACACCTCGAACATTTACTCGCGCCGTGTCCTGGCTGGCGAG 4542
Query 55604 TTTGTCATGATCAACAAGCACCTCGT----CAAGGACCTGCAGAAGATCAACAAGTGGAA 55659
|| | ||||| ||| || ||||||| || | || ||||
Sbjct 4543 TTCCAAGTAGTCAACC----CCTGGTTGCTCAAGGACTTGGTCGACATGGGTCTGTGGTC 4598
Query 55660 CCCGCAGATCAAGACGGATATTGT-GCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGAT 55716
| || |||| ||| | ||||| ||| || ||| ||||||| || |
Sbjct 4599 TGACAACATGAAGAACCGTATCATCGCGGA-CGGTGGCTCCATCCAGAACATCCCCAACA 4657
Query 55717 TCCTCTGC-GTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTG 55774
||| |||| | | |||||| | ||| ||| || |||||||| | ||| | |
Sbjct 4658 TCC-CTGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGTACCATC 4716
Query 55775 ATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTC 55834
| | ||| |||||| ||||| || | ||| || ||||||||||| || |||||| |
Sbjct 4717 GTCCAGATGGCTGCTGACCGTGGAGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCAC 4776
Query 55835 ATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGA 55894
||| || | || || ||| |||| | | || ||||||||| || |||||| ||
Sbjct 4777 ATGAAGGACCCAACAATGGGCAAGATCACATCCATGCACTTTGCTGGTTGGAAGCTTGGC 4836
Query 55895 CTCAAGACGGGTATGTACTATCTGCGGACC 55924
|||||||| || |||||||| || || |||
Sbjct 4837 CTCAAGACCGGCATGTACTACCTCCGTACC 4866
>seq904
Length=81408
Score = 136 bits (150), Expect = 4e-27
Identities = 216/302 (72%), Gaps = 6/302 (2%)
Strand=Plus/Plus
Query 117302 CGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAAT 117361
|||||| | |||||||| | ||| |||||||| | |||||||| | ||| | ||||||
Sbjct 30483 CGAGTGTAGATGTAACGTGGGCTGGCAGCATCACTTCCACCAGCCAAACGAGAACCGAAA 30542
Query 117362 TGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTG 117421
| |||||| ||||||| | ||| | |||||| | ||||||||||| |||||| | |
Sbjct 30543 TTTCCACTTGGCTCCAGGCAGTTGACGTTGTTTGAGCCCACAAAGTCTTGAGCGAGACCG 30602
Query 117422 ACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCAC-GTA 117480
| ||| ||||| || || | ||| || || || || |||||| | ||| || |||
Sbjct 30603 ATAATAGTACCCTGCAGCGACTGCTCTCCGTGTTGGTATGCCGTCAG-TCCAGAACAGTA 30661
Query 117481 GCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTT-CTTCTTGAGGCAGGCATAAA 117539
|| || |||| | | |||||||| || || || | ||| | | | ||| | || |
Sbjct 30662 ACCAGCAAGCTCAACAACCTTCATATCCGAAGTAATGTTGCGAGTGAATGCA-GAGTAGA 30720
Query 117540 TCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGG-ATCGAACGCTTGATG 117598
| ||||| ||||||| ||||| ||||| || ||| ||||| || || ||| || ||
Sbjct 30721 TGACCTTTCGCTGACCCGGCTTAAGACCGTCAATAACG-GAGGGAATGGATCGCATGTTG 30779
Query 117599 TC 117600
||
Sbjct 30780 TC 30781
>seq512
Length=30657
Score = 127 bits (140), Expect = 2e-24
Identities = 342/511 (67%), Gaps = 18/511 (4%)
Strand=Plus/Minus
Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849
|| ||||| || | ||||||| ||| || ||||||||||| | ||| || |||| |
Sbjct 17962 TCGTTCGAGAAGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCG 17903
Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909
||||| || ||||||||| || ||||| |||||||| || || || || || ||
Sbjct 17902 AAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAG 17843
Query 74910 GGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGC-AG 74964
| | ||| ||| ||||| | |||||| ||||| ||| | | | || ||
Sbjct 17842 GTAGAATC-CTTGTCTTGGATCCACCTGACAGCCCAGTCAGC-CTTCTTCTTAATGCAAG 17785
Query 74965 GGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGT 75024
| | ||| ||||| || | ||||||| || | | | ||||||| | |||
Sbjct 17784 GAATAGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGT 17725
Query 75025 CAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGA 75084
| || | || ||||| ||||| | ||||| |||| | | ||| | ||||||
Sbjct 17724 CGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGA 17665
Query 75085 AAGACCGCGCCTCTGCAATCTGTACATC-CT-TTGAAAAATTCATGTCGATATTCTCCAT 75142
| | || ||||||| || || || || || |||| || | || ||||| |
Sbjct 17664 AGCAGCGGGCCTCTGGGATTTGGACCTCACTGCTGAAGCGCTC--GAGGAGGTTCTCGTT 17607
Query 75143 GACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATC 75202
||| || ||||| ||||||||||| ||||| || || ||| |||| |||||||||
Sbjct 17606 GACAATTCCGTCAGAGGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATC 17547
Query 75203 GTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGT 75259
||| ||| | |||| ||| || | |||||| | | |||||||||||| | ||
Sbjct 17546 GTCGTTGAGACGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGT 17487
Query 75260 CCAGAAA-CTCCCAATC-GCCTTTTTGTACA 75288
||||||| | || || ||||| |||||||
Sbjct 17486 CCAGAAAGATGCC--TCGGCCTTCTTGTACA 17458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547190793863000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |