Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 98.7 6e-16
seq347 86.0 4e-12
>seq1689
Length=16827
Score = 98.7 bits (108), Expect = 6e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| ||||| || |||||| || ||||| || || || || || ||
Sbjct 15019 AGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 14960
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| |||||||| || ||||| || || | ||| || |||||||| || | |||||||
Sbjct 14959 CCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCC 14900
Query 34609 TTGTCTGTGATCTT 34622
|||||| ||||||
Sbjct 14899 TTGTCTTGGATCTT 14886
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||||||| ||||| |||||| |||||||| || || ||
Sbjct 15484 CCACCACGAAGACGGAGAACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAC 15425
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || || || || ||||| || || || | ||||| |||||||| ||
Sbjct 15424 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGA 15365
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| ||| || | || ||| | ||| || || ||||||
Sbjct 15364 ATGCCCTCCTTGTCT-TGAATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCCAC 15306
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || ||||| || || || | || || || |||||||||||
Sbjct 15305 CTCAAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 15258
Score = 91.5 bits (100), Expect = 9e-14
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||||| || |||||| |||||| |||||||| || || ||
Sbjct 15256 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 15197
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || ||||| || || || ||||| || | ||||| |||||||| ||
Sbjct 15196 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 15137
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| ||||||||||| ||||||
Sbjct 15136 ATGCCCTCCTTGTCCTGGATCTT 15114
Score = 86.0 bits (94), Expect = 4e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | |||||| | |||||| || |||||||||||||| || ||||| || ||
Sbjct 15941 GCCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 15882
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || | | || || || || ||||| ||||| || | ||||| |||||||| ||
Sbjct 15881 CAGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGG 15822
Query 34599 CACTCCCTCCTTGTC 34613
| |||||||| ||
Sbjct 15821 GATACCCTCCTTATC 15807
>seq347
Length=76637
Score = 86.0 bits (94), Expect = 4e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||| || |||||| |||||| || ||||| || || ||||| || || | || ||
Sbjct 19972 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATCCTCG 19913
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| || || ||||| || || | ||||| |||||||| || | |||||||||||| |
Sbjct 19912 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 19853
Query 34618 ATCTT 34622
|||||
Sbjct 19852 ATCTT 19848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314715465198605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |