Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 93.3 3e-14
>seq1689
Length=16827
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || |||||||| ||||| || || || || ||||||||||| ||||| || |
Sbjct 15030 ATGCAAATCTTCGTTAAGACCCTTACTGGCAAGACCATCACTCTCGAGGTTGAGTCGTCC 15089
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| || || | || || || ||
Sbjct 15090 GACACCATCGACAATGTGAAGTC-GAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 15148
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || ||||| ||||| || || || || | |||||| | ||| |||||
Sbjct 15149 GCAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAA 15208
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 15209 CATTCAGAAGGAGTCCAC 15226
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||| | || ||||| || ||||||||||| ||||| || ||
Sbjct 15714 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCTTCG 15773
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || ||| || || || ||| | || || || ||
Sbjct 15774 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 15833
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || ||||| || || || ||||| || | | || | |||| ||||||
Sbjct 15834 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCAGGACGCTGAGCGACTACAAC 15893
Query 23791 ATACAAAAAGAG 23802
|| || || |||
Sbjct 15894 ATCCAGAAGGAG 15905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337994419671980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |