Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3654 165 1e-35 >seq3654 Length=7047 Score = 165 bits (182), Expect = 1e-35 Identities = 406/613 (66%), Gaps = 2/613 (0%) Strand=Plus/Minus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 ||||| ||||| || | || || |||| ||||||||||| || |||||||| | | | Sbjct 3743 TCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGGGCACATGAGAGTC 3684 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 ||||| || | | || || || ||||| ||||||||||| ||||| ||||| || Sbjct 3683 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAC 3624 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 | || |||| | ||| || ||||| |||||| | | || || ||||| | Sbjct 3623 AAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAG 3564 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||| | |||||||| || | || || || | | | ||||| || || || || ||| Sbjct 3563 ACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTTGTTGCCACCC 3504 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || || | ||||| || ||||| || | || | | ||| || | |||||||| || Sbjct 3503 TGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCGTTCGAG 3444 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 |||| || || || | ||| || ||| | || || ||| |||| | || Sbjct 3443 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAATGTTCAATCCG 3384 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT-TTCAATGTATCGTAGATACCCTC 78343 || ||||| || |||| || || | || || ||| || | ||| || ||||||||||| Sbjct 3383 ATGCCTCCAGCAGTCTTTGAGATCATGGCACA-CGTCTTGAGTGTGTCATAGATACCCTC 3325 Query 78344 TATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 78403 ||||| || ||| |||||| | | || ||| |||| || || || || Sbjct 3324 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTACC 3265 Query 78404 TGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGT 78463 ||||| || | ||| || || || || || || |||| ||| | || |||||||| Sbjct 3264 AGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAAGACATGAGGTTGTATGT 3205 Query 78464 TTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATG 78523 || || | || || ||| ||||| || || || |||||||| | ||| || Sbjct 3204 CTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCATGTG 3145 Query 78524 CTGAGGTCTTTCA 78536 ||| || || ||| Sbjct 3144 CTGCGGCCTCTCA 3132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694636801818400