Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 165 1e-35
>seq3654
Length=7047
Score = 165 bits (182), Expect = 1e-35
Identities = 404/607 (67%), Gaps = 4/607 (1%)
Strand=Plus/Minus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
||||| ||||| || | || || |||||||||| ||||| || || ||||| | | |
Sbjct 3743 TCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGGGCACATGAGAGTC 3684
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| || || | | || || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 3683 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAC 3624
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
| || |||| | ||| || ||||| |||||| | | || |||||||| |
Sbjct 3623 AAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAG 3564
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
| ||| | |||||||| || | || || || | | | || || || || || || |||
Sbjct 3563 ACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTTGTTGCCACCC 3504
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
|| || | ||||| |||||||| || | || | | ||| || | || ||||| ||
Sbjct 3503 TGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCGTTCGAG 3444
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
| || || || || | ||| || ||| ||||| ||| ||| | ||
Sbjct 3443 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAATGTTCAATCCG 3384
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT-TTCAATGTGTCATAGATGCCCTC 76938
|| ||||| || | || ||||| | ||||| ||| || | |||||||||||| |||||
Sbjct 3383 ATGCCTCCAGCAGTCTTTGAGATCATGGCACA-CGTCTTGAGTGTGTCATAGATACCCTC 3325
Query 76939 TATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998
|||||||| ||| |||||| | | || ||| |||| || || || ||
Sbjct 3324 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTACC 3265
Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGT 77058
||||| || | ||| || || || || ||||| |||| ||| | || ||||||||
Sbjct 3264 AGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAAGACATGAGGTTGTATGT 3205
Query 77059 TTCAAT-AACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117
|| || || | || |||||| ||||| || || || |||||||| | ||| |
Sbjct 3204 CTCGATGGTCTTC-TCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCATGT 3146
Query 77118 GCTGAGG 77124
|||| ||
Sbjct 3145 GCTGCGG 3139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712901560459200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |