Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3654 165 1e-35 >seq3654 Length=7047 Score = 165 bits (182), Expect = 1e-35 Identities = 404/607 (67%), Gaps = 4/607 (1%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| ||||| || | || || |||||||||| ||||| || || ||||| | | | Sbjct 3743 TCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGGGCACATGAGAGTC 3684 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | | || || || ||||| ||||||||||| ||||| ||||| || Sbjct 3683 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAC 3624 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 | || |||| | ||| || ||||| |||||| | | || |||||||| | Sbjct 3623 AAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAG 3564 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| | |||||||| || | || || || | | | || || || || || || ||| Sbjct 3563 ACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTTGTTGCCACCC 3504 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||||| |||||||| || | || | | ||| || | || ||||| || Sbjct 3503 TGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCGTTCGAG 3444 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | || || || || | ||| || ||| ||||| ||| ||| | || Sbjct 3443 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAATGTTCAATCCG 3384 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT-TTCAATGTGTCATAGATGCCCTC 76938 || ||||| || | || ||||| | ||||| ||| || | |||||||||||| ||||| Sbjct 3383 ATGCCTCCAGCAGTCTTTGAGATCATGGCACA-CGTCTTGAGTGTGTCATAGATACCCTC 3325 Query 76939 TATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998 |||||||| ||| |||||| | | || ||| |||| || || || || Sbjct 3324 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTACC 3265 Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGT 77058 ||||| || | ||| || || || || ||||| |||| ||| | || |||||||| Sbjct 3264 AGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAAGACATGAGGTTGTATGT 3205 Query 77059 TTCAAT-AACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117 || || || | || |||||| ||||| || || || |||||||| | ||| | Sbjct 3204 CTCGATGGTCTTC-TCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCATGT 3146 Query 77118 GCTGAGG 77124 |||| || Sbjct 3145 GCTGCGG 3139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712901560459200