Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq347 134 3e-26 seq1689 120 7e-22 >seq347 Length=76637 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 |||||| ||||| | |||||||| ||||| || ||||||||||| || | | || | Sbjct 19982 GAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACG 19923 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| || | ||||||||||| | ||||| || Sbjct 19922 GCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTC 19863 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | |||| || ||| || ||||| || Sbjct 19862 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 19803 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| |||||||| || ||||||||||||| ||||| Sbjct 19802 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 19764 >seq1689 Length=16827 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| |||||||| || |||||||| || |||||||||||||| | | ||| | Sbjct 15704 GAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCG 15645 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || ||||| || || | ||||||||||| | || || || Sbjct 15644 GCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTC 15585 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | | | || || ||| ||||| || || Sbjct 15584 CTTATCTTGGATCTTCGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGT 15525 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || ||||||||||| ||||||| ||||| Sbjct 15524 AATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15486 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| ||||| ||||| || || |||||||| || | | || | ||||| Sbjct 15470 GAGAACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATC 15411 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || |||||||| || | ||||||||||| | || || ||||| || Sbjct 15410 CTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 15351 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| || ||||| | || | | | || || ||| || ||||| ||||| || Sbjct 15350 TTGAATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCCACCTCAAGCGTAATCGT 15291 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || |||||||| ||||| | |||||| Sbjct 15290 CTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 15258 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | |||||||| ||||| || || |||||||| |||| | ||| | ||||| Sbjct 15241 AGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCC 15182 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| || | ||||||||||| | ||| || ||||| || Sbjct 15181 TCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 15122 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | | |||| || ||| || || ||||| || || Sbjct 15121 TGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGAGTGATGGTC 15062 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| ||||||| ||||| Sbjct 15061 TTGCCAGTAAGGGTCTTAACGAAGATTTGCAT 15030 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||| || ||||||||||| ||| | || || ||||| || | Sbjct 15920 CAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTCCA 15862 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| || | ||||||||||| | ||| || ||||| || |||| Sbjct 15861 GCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAA 15802 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | |||| ||| ||| || || ||||| || || || | Sbjct 15801 TCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGAGTGATGGTCTTTC 15742 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| ||||| | |||||| Sbjct 15741 CAGTCAAGGTCTTGACGAAAATCTGCAT 15714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153766323432635