Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq347 156 1e-32
seq1689 136 1e-26
seq475 134 3e-26
>seq347
Length=76637
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || || || || |||||||| |||||||| || |||
Sbjct 19767 CAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGAC 19826
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||| |||||||| || ||||| || |||||||||||
Sbjct 19827 ACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 19886
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| ||||| | || ||| | || || ||| ||
Sbjct 19887 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGACTACAACATC 19946
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||||||||
Sbjct 19947 CAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTC 19982
>seq1689
Length=16827
Score = 136 bits (150), Expect = 1e-26
Identities = 143/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || | || ||||| || ||||| |||||||| || || |||
Sbjct 15717 CAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCTTCGGAC 15776
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||||||||| || || || ||||| |||||||||||
Sbjct 15777 ACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAGCAG 15836
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| ||||| || ||| || ||| ||
Sbjct 15837 CGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCAGGACGCTGAGCGACTACAACATC 15896
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 15897 CAGAAGGA 15904
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||||| || || || ||||| || || |||||||| || ||
Sbjct 15261 CAGATTTTCGTCAAGACTCTTACTGGCAAGACGATTACGCTTGAGGTGGAGTCGTCGGAT 15320
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||| ||||| || || || ||||||||||||||
Sbjct 15321 ACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGCATTCCTCCGGACCAGCAG 15380
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| || ||||| | || || | || || ||| |
Sbjct 15381 CGCCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAACATT 15440
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || |||||| | |||
Sbjct 15441 CAGAAGGAGTCGACTCTGCATTTGGTT 15467
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| ||||| || || || || || || || || ||
Sbjct 15489 CAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCGGAT 15548
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| || || || || || || || |||||||||||
Sbjct 15549 ACCATCGATAACGTCAAGTCGAAGATCCAAGATAAGGAGGGCATTCCCCCGGACCAGCAG 15608
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || |||||||| || || | ||||| | ||||| ||| ||
Sbjct 15609 CGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCTGATTACAACATC 15668
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || || |||||||||
Sbjct 15669 CAGAAGGAGTCTACGCTACATCTTGTT 15695
Score = 127 bits (140), Expect = 5e-24
Identities = 152/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || || || ||||| |||||||| || || |||
Sbjct 15033 CAAATCTTCGTTAAGACCCTTACTGGCAAGACCATCACTCTCGAGGTTGAGTCGTCCGAC 15092
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| || || ||||| |||||||||||
Sbjct 15093 ACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 15152
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| | ||||| |||| || ||| |
Sbjct 15153 CGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAACATT 15212
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 15213 CAGAAGGAGTCCACTCTTCA-CTTG 15236
Score = 125 bits (138), Expect = 2e-23
Identities = 139/184 (76%), Gaps = 1/184 (1%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || |||||||||||||| || ||| || |||||||| ||||| ||
Sbjct 14826 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACCATCGACAACGTTAAGAGC 14885
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| || ||||| || ||||| || |||||||||||||| || ||||||||||||||
Sbjct 14886 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAAG 14945
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|| || || || || | || || |||| || ||| |||| || || || || || ||
Sbjct 14946 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA- 15004
Query 178125 CTTG 178128
||||
Sbjct 15005 CTTG 15008
>seq475
Length=36479
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || | || || || || |||||||| |||||||| || ||||| |||
Sbjct 18211 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACTATC 18270
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| |||||||| || ||||| || |||||||||||||| ||
Sbjct 18271 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAACGCCTG 18330
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || || ||||| || |||||| | |||||| |||| || ||| |||| ||
Sbjct 18331 ATCTTTGCTGGCAAGCAGCTTGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAA 18389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203674366959890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |