Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq347 161 9e-35
seq1689 156 4e-33
seq475 127 2e-24
>seq347
Length=76637
Score = 161 bits (178), Expect = 9e-35
Identities = 164/212 (77%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||| || || ||| ||||||||| ||||| ||||| || ||||| || | || |||
Sbjct 19972 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATCCTCG 19913
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||||||||| ||||||||||| ||||||| ||||| | |||||||||| |
Sbjct 19912 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 19853
Query 41774 ATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
|| || ||| || | || | ||||||| |||||||||||| | || || || |
Sbjct 19852 ATCTTGGACTTGACATTGTCG--ATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCT 19795
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| |||||||| ||||| ||||| || ||||||
Sbjct 19794 TGCCCGTCAGGGTCTTCACGAAGATTTGCATG 19763
>seq1689
Length=16827
Score = 156 bits (172), Expect = 4e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| |||||| || ||||||||||||||| ||||| ||
Sbjct 15484 CCACCACGAAGACGGAGAACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAC 15425
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || |||||||| || ||||| ||||||||||| ||||||| |||
Sbjct 15424 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGA 15365
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||| | ||| | || | | ||| | | | || || |||||||||
Sbjct 15364 ATGCCCTCCTTGT-CTTGAATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCCAC 15306
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | ||| ||||| || || || || ||||| ||||||||||||||
Sbjct 15305 CTCAAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 15258
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | |||| || || ||| ||||||||||||||| |||||||||
Sbjct 15256 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 15197
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||||||||| || || ||||||||||| ||||||| |||
Sbjct 15196 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 15137
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| || |||| || | | | |||||| |||||| ||
Sbjct 15136 ATGCCCTCCTTGTCCTGGATCTTCGACTTC-ACATTGTCGATGGTGTCGGACGACTCAAC 15078
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || || || ||||| ||||| || |||||
Sbjct 15077 CTCGAGAGTGATGGTCTTGCCAGTAAGGGTCTTAACGAAGATTTGCAT 15030
Score = 131 bits (144), Expect = 2e-25
Identities = 169/232 (73%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || ||||| ||||| ||||||||| ||||| || || ||
Sbjct 15712 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGAC 15653
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| |||||||||||||| ||||| ||||||||||| ||||||| ||||
Sbjct 15652 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 15593
Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810
| || |||||| || ||| || ||| | | | ||| | || || |||||
Sbjct 15592 ATGCCCTCCTTATCTTGGATCTTCGACTTGACGTTATCGATG-----GTATCCGACGACT 15538
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || |||| ||| || || || || || || ||||| ||||| || |||||
Sbjct 15537 CGACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15486
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || ||||| | ||||| || || |||||||||||||| ||||| ||||||
Sbjct 15941 GCCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 15882
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || | | || || |||||||| || || || ||||||||||| ||||||| ||
Sbjct 15881 CAGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGG 15822
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||| ||| ||| | || | | ||| | | | ||||| ||||| |
Sbjct 15821 GATACCCTCCTTATCC-TGAATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAA 15763
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || || || || |||| ||||| ||||||||||||||
Sbjct 15762 CCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 15714
Score = 113 bits (124), Expect = 4e-20
Identities = 150/206 (73%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| |||||||||
Sbjct 15028 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 14969
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || || ||||| |||||||| ||||| || || ||||||| ||||
Sbjct 14968 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 14909
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| || ||| |||| | | | || ||| ||||| ||
Sbjct 14908 ATTCCCTCCTTGTCTTGGATCTTGCTCTT-AACGTTGTCGATGGTATCGGAGGACTCAAC 14850
Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840
||| | || || || || || ||||
Sbjct 14849 CTCGAGGGTGATGGTCTTGCCAGTCA 14824
>seq475
Length=36479
Score = 127 bits (140), Expect = 2e-24
Identities = 139/183 (76%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||||| || ||||| | || || ||||||||||| || || |
Sbjct 18391 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGA 18332
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
||||||| || ||||||| ||||| | |||||||||| ||| || ||| || |
Sbjct 18331 TCAGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 18272
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | ||||||| |||||||||||| | || || || || ||||||| ||||| ||
Sbjct 18271 CG--ATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 18214
Query 41851 GAA 41853
|||
Sbjct 18213 GAA 18211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462282705122000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |