Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq18 96.9 7e-15
>seq18
Length=361580
Score = 96.9 bits (106), Expect = 7e-15
Identities = 302/462 (65%), Gaps = 8/462 (2%)
Strand=Plus/Minus
Query 230180 AGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCA 230239
|||||||||| |||| | ||||| ||||| | || ||||| ||| | |||
Sbjct 111135 AGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCA 111076
Query 230240 TCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCA 230299
| || ||||| ||| || | ||| ||||||| | || |||||| |||||
Sbjct 111075 TTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCT 111016
Query 230300 GTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACA 230359
|| |||||||||||||| | |||| | || | | || | ||| |||
Sbjct 111015 CCCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCATCTC-AGACAC 110957
Query 230360 AGCTACCATTCGAGACGG---TCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGG 230416
|| ||| ||| || || || | ||||||| || || || | ||| |||
Sbjct 110956 CGC--CCAAGTAAGAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAGG 110899
Query 230417 AGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTT-ATGGGA 230475
||||| | ||| || |||| ||| || | ||||||||||| ||||| |||
Sbjct 110898 AGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCC-AACTTGATGAAG 110840
Query 230476 CAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTAC 230535
|| ||||| || ||||| |||||| | | | | | || ||| ||||||| |||
Sbjct 110839 CAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTAC 110780
Query 230536 AACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTC 230595
|| | | ||||| |||| || |||||| ||| || || ||| ||||||||||||
Sbjct 110779 AAGGCGACCAACCCATTTGACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTC 110720
Query 230596 TTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||| ||||| || ||||| || | | ||||||| |||
Sbjct 110719 TTCGAGAAGCGCGTTGCCGACTACCAAAAGACTGGTGTCATG 110678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057818456671670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |