Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq18 96.9 7e-15 >seq18 Length=361580 Score = 96.9 bits (106), Expect = 7e-15 Identities = 302/462 (65%), Gaps = 8/462 (2%) Strand=Plus/Minus Query 230180 AGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCA 230239 |||||||||| |||| | ||||| ||||| | || ||||| ||| | ||| Sbjct 111135 AGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCA 111076 Query 230240 TCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCA 230299 | || ||||| ||| || | ||| ||||||| | || |||||| ||||| Sbjct 111075 TTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCT 111016 Query 230300 GTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACA 230359 || |||||||||||||| | |||| | || | | || | ||| ||| Sbjct 111015 CCCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCATCTC-AGACAC 110957 Query 230360 AGCTACCATTCGAGACGG---TCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGG 230416 || ||| ||| || || || | ||||||| || || || | ||| ||| Sbjct 110956 CGC--CCAAGTAAGAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAGG 110899 Query 230417 AGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTT-ATGGGA 230475 ||||| | ||| || |||| ||| || | ||||||||||| ||||| ||| Sbjct 110898 AGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCC-AACTTGATGAAG 110840 Query 230476 CAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTAC 230535 || ||||| || ||||| |||||| | | | | | || ||| ||||||| ||| Sbjct 110839 CAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTAC 110780 Query 230536 AACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTC 230595 || | | ||||| |||| || |||||| ||| || || ||| |||||||||||| Sbjct 110779 AAGGCGACCAACCCATTTGACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTC 110720 Query 230596 TTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||| ||||| || ||||| || | | ||||||| ||| Sbjct 110719 TTCGAGAAGCGCGTTGCCGACTACCAAAAGACTGGTGTCATG 110678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057818456671670