Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq18 116 4e-21 >seq18 Length=361580 Score = 116 bits (128), Expect = 4e-21 Identities = 363/559 (65%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || ||||| || ||| ||||||||||| | || | |||||||| || || || Sbjct 110982 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGG 111041 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 || | ||| ||||||||||| || ||||| || ||||| || || || || || ||||| Sbjct 111042 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAG 111101 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTCATGT 24311 || || || || || || ||||||| || | | | || || | | || || Sbjct 111102 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAATCCTTATCTTGG 111161 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 |||||| | ||||| ||||||||||| || | ||||| || ||||| || ||||| Sbjct 111162 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 111221 Query 24372 AAGAGATAGtttttttCA--TTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 24429 ||||| || | || | || | || || | ||||| ||||| | || || Sbjct 111222 AAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGTCAATGAGGAGGGAGTATG 111279 Query 24430 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 24489 | || | |||||||| || || ||||| || |||||||| || | || || | | Sbjct 111280 TCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 111339 Query 24490 TCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 24549 |||| || || | | || || || | || || || || ||||||||| || | Sbjct 111340 TCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGG 111399 Query 24550 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCC 24606 | || || || | || || || || || ||||| | | | || |||| Sbjct 111400 CGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCATTGAGGCGGTTGTTCC 111459 Query 24607 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 24666 | || | | || || || | ||| | || || ||||||| || || || || |||| Sbjct 111460 AGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCTTCCGCCT 111519 Query 24667 TTTTATACATATTCCAGAT 24685 | || ||||| | |||||| Sbjct 111520 TCTTGTACATCTGCCAGAT 111538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593718564598320