Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq23 120 3e-22 seq22 107 2e-18 seq28 93.3 4e-14 >seq23 Length=328845 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || ||||| || ||||||||||| || || ||||| |||||| Sbjct 85314 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 85373 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| || |||||||| || ||||| || |||||||||||| | Sbjct 85374 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 85433 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | ||| || | || | || ||||| | || | ||| || Sbjct 85434 ATCTTCGACTTGACGTTATCAATGGTATCGGATGAT-TCCACCTCAAGCGTAATCGTCTT 85492 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| ||||||||||||||||| Sbjct 85493 TCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||| || || |||||||| ||||||| || | | |||||| Sbjct 84857 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 84916 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || ||||| |||| || |||||||| || || || || |||||||| || Sbjct 84917 CAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTATCCTG 84976 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | || | |||||||| ||| ||||||| || | || || Sbjct 84977 AATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTT 85036 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || ||||||||||| Sbjct 85037 TCCAGTCAGGGTCTTGACGAAAATCTGCAT 85066 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || ||||||||||| ||| | |||||| ||||| Sbjct 85542 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 85601 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| | || || |||||||| || ||||| |||||||||||||| Sbjct 85602 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 85661 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| ||||| | || | || ||| Sbjct 85662 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 85721 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || || |||||||| Sbjct 85722 CCAGTGAGGGTCTTGACGAAGATCTGCAT 85750 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || ||||||||||| || ||||| |||||||||||| || || Sbjct 85098 GTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCCTCGAGCTGCTTGCCC 85157 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || || |||||||| || || || ||||||||||| ||| || || || Sbjct 85158 GCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTGGACTTG 85217 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||| |||| |||||| || | || | || || ||||| || || Sbjct 85218 ACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGTGAGGGTC 85277 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 85278 TTGACGAAGATTTGCAT 85294 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| || || |||||||| ||| | ||||| ||||| Sbjct 85770 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 85829 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || ||| |||| ||||| ||||| || || || || |||||||||||| Sbjct 85830 AGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGG 85889 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | |||| ||| || | ||||||||| | ||| | || ||| Sbjct 85890 ATCTTGCTCTTAACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTG 85949 Query 118710 CCGGTCA 118716 || |||| Sbjct 85950 CCAGTCA 85956 >seq22 Length=330427 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 |||||| || | ||||| |||||||| | || ||||| || || |||||||| || Sbjct 150834 ACCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 150775 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| ||||||||||| || || ||| |||| || |||||||| || || || Sbjct 150774 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 150715 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || ||||||||||| || || || || | |||| ||||| | ||| || Sbjct 150714 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCAC 150655 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||| | ||| | || ||||| ||||| || || || || || |||||| || Sbjct 150654 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 150603 >seq28 Length=287958 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||| | |||||| |||||||||||| || ||||| |||| Sbjct 243635 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 243694 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 || |||||||| || ||||| || |||||||||||| || || || || | ||| Sbjct 243695 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 243754 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | || || | | ||||||||| | ||| | || ||||| |||| || || || || Sbjct 243755 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 243813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828237491028