Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq23 114 1e-20
seq22 111 2e-19
>seq23
Length=328845
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|||||||||| ||| |||||| ||||| ||||| || | ||| || || | || ||
Sbjct 85314 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 85373
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|||||||||||||| || || || ||||||||||| | || | | |||||||| | ||
Sbjct 85374 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGT-CTTG 85432
Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
| | || | |||| | | | || ||| |||||||| || | ||| || || ||
Sbjct 85433 AATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTT 85492
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || ||||||||||| || |||||
Sbjct 85493 TCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| ||||| || | ||||| || |||| || |||||||| || |||||
Sbjct 85559 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAA 85618
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | || |||||||||| ||| || || | |
Sbjct 85619 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 85678
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||| ||| || || || | |||||||| ||||| || || ||||| ||
Sbjct 85679 GTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 85738
Query 43172 AAAGATTTGCAT 43183
||||| |||||
Sbjct 85739 GAAGATCTGCAT 85750
Score = 98.7 bits (108), Expect = 1e-15
Identities = 167/237 (70%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 42949 CCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 43008
|||| || || || | | ||| | |||||| || | ||||||||||| || || ||||
Sbjct 84832 CCTACTGGCCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGT 84891
Query 43009 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 43068
| || ||| |||| | | || || |||||||| ||||| || || || ||||||||||
Sbjct 84892 AGTCGCTCAGCGTCCTCCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGT 84951
Query 43069 CGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCT 43126
| | || | | |||||| ||| ||| | || | |||| ||| | | | |||||
Sbjct 84952 CTGGTGGGATACCCTCCTTATCC-TGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGA 85009
Query 43127 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || |||| || ||||| || || || || ||||| || || || |||||
Sbjct 85010 AGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 85066
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || |||||||||| ||| || || | || || |||||||| || |||||
Sbjct 85103 CTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCCTCGAGCTGCTTGCCCGCGAA 85162
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | || |||||| || ||| || |||| |
Sbjct 85163 AATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTGGACTTGACGTT 85222
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | || || ||| || || || | ||| || || || || || || ||||| ||
Sbjct 85223 ATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGTGAGGGTCTTGAC 85282
Query 43172 AAAGATTTGCAT 43183
|||||||||||
Sbjct 85283 GAAGATTTGCAT 85294
>seq22
Length=330427
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
||||| || | ||| |||||| || || ||||| || | || || || |||| ||
Sbjct 150815 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 150756
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|||||||| || ||||| || || ||||||||||| | || | | |||||||||| |
Sbjct 150755 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 150696
Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154
|| || |||| | | | |||||| ||| ||||| || | ||||| || |||
Sbjct 150695 ATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTG 150636
Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || ||||| || |||||||||||
Sbjct 150635 CCCGTCAGGGTCTTCACGAAGATTTGCAT 150607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571814676582520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |