Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq46 114 3e-20
seq18 104 5e-17
>seq46
Length=214393
Score = 114 bits (126), Expect = 3e-20
Identities = 183/259 (71%), Gaps = 8/259 (3%)
Strand=Plus/Plus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| |||||||||||||| ||||| || || ||| || || ||||| ||||||
Sbjct 140126 CCGATACCTCCAGCAGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCC 140185
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904
||||| ||||| || | | | | | | |||||| || || || |||| |||| |||
Sbjct 140186 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTG-GTGT 140244
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || ||||| |||||||| || || || || | | |||||||| | ||
Sbjct 140245 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTCGAAGACATGAGGTTGTA 140304
Query 94965 TGTTTCAATGACAGATTT---GATGTCTGATCCGTGAATGCCGACAGCCACACGCATAAT 95021
||| || || || || || || |||||||| || || || |||||||||||
Sbjct 140305 TGTCTC---GATAGTCTTCTCAATATCCTCGCCGTGAATACCCACCGCAACACGCATAAT 140361
Query 95022 CATGTCCTGAGGGCGCTCA 95040
||||| ||| || | ||||
Sbjct 140362 CATGTGCTGCGGCCTCTCA 140380
>seq18
Length=361580
Score = 104 bits (114), Expect = 5e-17
Identities = 160/228 (70%), Gaps = 9/228 (4%)
Strand=Plus/Minus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATT------T 101904
|||||||||||||| | ||||| ||| ||||| ||| |||| |||| |
Sbjct 111197 CATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAG---ATAAGGATTCCACTTT 111141
Query 101905 GGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGC 101964
|| | | | |||||||| ||||| ||||| || |||||||| ||| | |||||
Sbjct 111140 CGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGC 111081
Query 101965 ATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTT 102024
|||||||||||| ||||||| | || | || |||| || |||| |||||| ||| |
Sbjct 111080 CTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCCAACGAGCT 111021
Query 102025 CATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
||| || | ||||| ||||| || ||||| || ||| | || ||
Sbjct 111020 CATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTT 110973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989578814270595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |