Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq18 140 4e-28
>seq18
Length=361580
Score = 140 bits (154), Expect = 4e-28
Identities = 367/554 (66%), Gaps = 7/554 (1%)
Strand=Plus/Plus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| || || | |||||||| || | || || || ||||| || || || |||||| |
Sbjct 110678 CATGACACCAGTCTTTTGGTAGTCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 110737
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
|| || || || |||||||| ||||| || ||||| | ||||| | || | | |
Sbjct 110738 CAGGGAGATGTTCTCCATGAAGTCAAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 110796
Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456
| | ||| | || || || |||||||| || || ||| ||||||| | |
Sbjct 110797 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 110856
Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516
|||| || | || | ||||| ||| |||| | || || || || ||| || |
Sbjct 110857 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACAG 110916
Query 33517 CATTTGTTATAATAAATCTAACGGT-TTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575
| | || || | | |||| ||||| ||| || | ||| | ||| ||
Sbjct 110917 CCTCGGTAATGACGTCTTGGACGGCCTTCTT-ACTTGGGCGGTGTCTGAGATGGGAGAAG 110975
Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635
| | || ||||| || ||| ||||||||||| | || | ||||| || ||
Sbjct 110976 AGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAG 111035
Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695
|| || || | ||| ||||||||||| || ||||| || ||||| ||||| || |||||
Sbjct 111036 GTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCGGAG 111095
Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTG 33752
|||||||| || || || ||||| ||||||| || | || | || || | |
Sbjct 111096 AAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAATCCTTA 111155
Query 33753 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33812
|| || |||||| | ||||| ||||||||||| || | ||||| || || || |||
Sbjct 111156 TCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATG 111215
Query 33813 GCATTAAAGAGATA 33826
||||| ||||| ||
Sbjct 111216 GCATTGAAGAGGTA 111229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629814380057520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |