Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq18 118 1e-21 >seq18 Length=361580 Score = 118 bits (130), Expect = 1e-21 Identities = 365/561 (65%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || ||||| || ||| ||||||||||| | || | |||||||| || || || Sbjct 110982 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGG 111041 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 || | ||| ||||||||||| || ||||| || ||||| || || || || || ||||| Sbjct 111042 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAG 111101 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 36334 || || || || || || ||||||| || | || | || || | | || || Sbjct 111102 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAATCCTTATCTTGG 111161 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 |||||| | ||||| ||||||||||| || | ||||| || ||||| || ||||| Sbjct 111162 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 111221 Query 36395 AAGAGATAGtttttttCA--TTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 36452 ||||| || | || | || | || || | ||||| ||||| | || || Sbjct 111222 AAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGTCAATGAGGAGGGAGTATG 111279 Query 36453 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 36512 | || | |||||||| || || ||||| || |||||||| || | || || | | Sbjct 111280 TCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 111339 Query 36513 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 36572 |||| || || | | || || || | || || || || ||||||||| || | Sbjct 111340 TCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGG 111399 Query 36573 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT-----TTGGTGTTAGTTTATT 36627 | || || || | || || || || || |||| ||| | | || || Sbjct 111400 CGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCATTGAGG--CGGTTGTT 111457 Query 36628 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 36687 ||| || | | || || || | ||| | || || ||||||| || || || || || Sbjct 111458 CCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCTTCCGC 111517 Query 36688 CTTTTTATACATATTCCAGAT 36708 ||| || ||||| | |||||| Sbjct 111518 CTTCTTGTACATCTGCCAGAT 111538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169435091560