Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq22 93.3 4e-14 seq18 82.4 8e-11 >seq22 Length=330427 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| || ||||| || || ||||| || || | |||| ||| ||| Sbjct 150815 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 150756 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || || || ||||||| || ||||| || || || || || || ||||| | Sbjct 150755 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 150696 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | ||||||| | ||||||||||| ||| | |||||| Sbjct 150695 ATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTG 150636 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || |||| || || ||||| |||||||| Sbjct 150635 CCCGTCAGGGTCTTCACGAAGATTTGCAT 150607 >seq18 Length=361580 Score = 82.4 bits (90), Expect = 8e-11 Identities = 168/250 (67%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 52824 AGACATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGT 52883 |||| | ||| ||||| ||| ||| || | ||||| || || || || | ||| Sbjct 110933 AGACGTCATTACCGAGGCTGTCAGCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTG 110874 Query 52884 ATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAG 52943 | || | ||||||||||| | | ||||| | ||||| ||||| || || ||||| Sbjct 110873 TGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAG 110814 Query 52944 ACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTAT 53003 ||| || | |||||| | ||| ||||| || ||| ||||| ||| || || Sbjct 110813 GCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGGCGACCAACCCATTTGACTTCAT 110754 Query 53004 GAACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTACAA 53063 | | ||||| || || | || || || ||||| ||||||| || || | ||| ||| | Sbjct 110753 GGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGCGTTGCCGACTACCA 110694 Query 53064 AATGTTTGGT 53073 || | |||| Sbjct 110693 AAAGACTGGT 110684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061463872800