Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq18 136 6e-27
>seq18
Length=361580
Score = 136 bits (150), Expect = 6e-27
Identities = 366/554 (66%), Gaps = 7/554 (1%)
Strand=Plus/Plus
Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715
||| || || | |||||||| || | || || || ||||| || || || |||||| |
Sbjct 110678 CATGACACCAGTCTTTTGGTAGTCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 110737
Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775
|| || || || |||||||| ||||| || ||||| | || || | || | | |
Sbjct 110738 CAGGGAGATGTTCTCCATGAAGTCAAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 110796
Query 49776 CAATTCAGAA-ATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834
| | ||| | || || || ||||| || || || ||| ||||||| | |
Sbjct 110797 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 110856
Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894
|||| || | || | ||||| ||| |||| | || || || || ||| || |
Sbjct 110857 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACAG 110916
Query 49895 CATCTGTTATAATAGATCTAACGGT-TTCTTCACTCGGTGGATGCAATAAATGTTTAAAC 49953
| || || || | | |||| ||||| ||| || | || | ||| ||
Sbjct 110917 CCTCGGTAATGACGTCTTGGACGGCCTTCTT-ACTTGGGCGGTGTCTGAGATGGGAGAAG 110975
Query 49954 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 50013
| | || ||||| || ||| ||||||||||| | || || |||||||| ||
Sbjct 110976 AGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAG 111035
Query 50014 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAA 50073
|| || || | ||| ||||||||||| || ||||| || ||||| || || || || ||
Sbjct 111036 GTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCGGAG 111095
Query 50074 AAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTG 50130
|||||||| || || || || || |||||||| || | || | || ||| | |
Sbjct 111096 AAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAATCCTTA 111155
Query 50131 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 50190
|| || |||||| | ||||| ||||||||||| || | ||||| || || || |||
Sbjct 111156 TCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATG 111215
Query 50191 GCATTAAAGAGATA 50204
||||| ||||| ||
Sbjct 111216 GCATTGAAGAGGTA 111229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718265127850760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |