Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq18 136 6e-27 >seq18 Length=361580 Score = 136 bits (150), Expect = 6e-27 Identities = 366/554 (66%), Gaps = 7/554 (1%) Strand=Plus/Plus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 ||| || || | |||||||| || | || || || ||||| || || || |||||| | Sbjct 110678 CATGACACCAGTCTTTTGGTAGTCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 110737 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775 || || || || |||||||| ||||| || ||||| | || || | || | | | Sbjct 110738 CAGGGAGATGTTCTCCATGAAGTCAAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 110796 Query 49776 CAATTCAGAA-ATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834 | | ||| | || || || ||||| || || || ||| ||||||| | | Sbjct 110797 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 110856 Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894 |||| || | || | ||||| ||| |||| | || || || || ||| || | Sbjct 110857 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACAG 110916 Query 49895 CATCTGTTATAATAGATCTAACGGT-TTCTTCACTCGGTGGATGCAATAAATGTTTAAAC 49953 | || || || | | |||| ||||| ||| || | || | ||| || Sbjct 110917 CCTCGGTAATGACGTCTTGGACGGCCTTCTT-ACTTGGGCGGTGTCTGAGATGGGAGAAG 110975 Query 49954 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 50013 | | || ||||| || ||| ||||||||||| | || || |||||||| || Sbjct 110976 AGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAG 111035 Query 50014 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAA 50073 || || || | ||| ||||||||||| || ||||| || ||||| || || || || || Sbjct 111036 GTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCGGAG 111095 Query 50074 AAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTG 50130 |||||||| || || || || || |||||||| || | || | || ||| | | Sbjct 111096 AAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAATCCTTA 111155 Query 50131 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 50190 || || |||||| | ||||| ||||||||||| || | ||||| || || || ||| Sbjct 111156 TCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATG 111215 Query 50191 GCATTAAAGAGATA 50204 ||||| ||||| || Sbjct 111216 GCATTGAAGAGGTA 111229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265127850760